KEGG   Drechmeria coniospora: 63713555
Entry
63713555          CDS       T11322                                 
Symbol
DCS_00912
Name
(RefSeq) ATP-dependent RNA helicase
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
dcon  Drechmeria coniospora
Pathway
dcon03013  Nucleocytoplasmic transport
dcon03015  mRNA surveillance pathway
dcon03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dcon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    63713555 (DCS_00912)
  09122 Translation
   03013 Nucleocytoplasmic transport
    63713555 (DCS_00912)
   03015 mRNA surveillance pathway
    63713555 (DCS_00912)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dcon03019]
    63713555 (DCS_00912)
   03041 Spliceosome [BR:dcon03041]
    63713555 (DCS_00912)
Enzymes [BR:dcon01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     63713555 (DCS_00912)
Messenger RNA biogenesis [BR:dcon03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     63713555 (DCS_00912)
Spliceosome [BR:dcon03041]
 Complex C
  Other components
   EJC/TREX
    63713555 (DCS_00912)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    63713555 (DCS_00912)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2 DUF4844 DUF6066
Other DBs
NCBI-GeneID: 63713555
NCBI-ProteinID: XP_040659130
UniProt: A0A151GRU1
LinkDB
Position
01:<3820029..>3822032
AA seq 436 aa
MSHEEDLIDYSDEEIGGNDTVPAPSGSNGKKSELATGNDVDKKGSYVGIHSTGFRDFLLK
PELLRAIGDCGFEHPSEVQQTCIPQALLGGDIICQAKSGLGKTAVFVLATLQQVEPINGE
VSVMVMCHTRELAYQIRDEYNRFSKYMPDIKTGVFYGGTPIKPDVDMLKSKDTCPHIIVG
TPGRLKALVRDKALRLGSVRIFVLDECDKMLDQPDMRTDVQEVFRATPTQKQVMMFSATL
SEAIKPICRKFMQNPTEHYVDEDTKLTLHGLQQYYVQLEEKEKNRKLNELLDELQFNQVI
IFVKSTIRATELDKLLKECNFPSIAVHSGVSQEERIKRYKEFKEFKKRICVATDVFGRGI
DIERINLAINYDLPADASSYLHRVGRAGRFGTKGLAISFVSSDQDQEVLKEIEKRFEVAL
PEFPKEGVEPSTYMAS
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgtcccacgaagaagatctcatcgattactccgatgaggagatcggtggaaacgacacc
gttcccgcccccagcggttccaatggcaagaagtcggagctcgctactggcaacgacgtc
gacaagaagggcagctacgttggcatccactcgactggtttccgcgactttctcctgaag
cccgagcttctccgcgctattggcgactgtggcttcgagcatccatcggaggtccagcaa
acttgcattcctcaggcccttctcggtggcgacatcatttgccaggcaaagtcaggcttg
ggaaagacggccgtcttcgtcctcgccaccctgcagcaggttgagccgatcaacggagag
gtctccgtcatggtcatgtgccacactcgcgagcttgcctaccagatccgcgatgagtac
aaccgattcagcaagtacatgcccgacatcaagacgggtgtcttctacggcggtaccccc
atcaagccggatgtcgacatgctcaagagcaaggacacgtgcccgcacatcatcgtcggt
acccccggccgactcaaggctctcgtccgcgacaaggcgctccgtctcggcagcgttcgc
atcttcgtgctcgacgagtgcgacaagatgctcgaccaacccgacatgcgcaccgatgtg
caggaggtgttccgggccacccccacgcagaagcaggtcatgatgttctcggccaccttg
tcggaggccatcaagcccatctgccgcaaattcatgcagaacccgacggagcactacgtc
gacgaggacaccaagctcacgctgcacggcctgcagcagtactacgtgcagctcgaggag
aaggaaaagaacagaaagctcaacgagcttctcgacgaacttcagttcaaccaggtcatc
atcttcgtcaagagcaccatccgcgcgaccgagctggacaagctcctgaaggaatgcaac
ttcccgtccatcgccgtccactcgggtgtgagccaggaggagcgcatcaagcgttacaag
gagttcaaggagttcaagaagcgcatctgcgttgccaccgacgtcttcggacgaggcatc
gacatcgagcgcatcaaccttgccatcaactacgacctcccggcggatgccagctcctac
ctgcaccgcgtaggtcgtgccggtcgattcggcaccaagggtcttgccatctcctttgtg
agcagcgaccaggatcaggaggtgctcaaggagattgagaagcgcttcgaggtggccctg
cccgagttccccaaggaaggggtggagccaagcacctacatggcgtcctag

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