Drechmeria coniospora: 63716353
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Entry
63716353 CDS
T11322
Symbol
DCS_03710
Name
(RefSeq) Pre-mRNA-splicing factor syf-1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
dcon Drechmeria coniospora
Pathway
dcon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
63716353 (DCS_03710)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcon03019
]
63716353 (DCS_03710)
03041 Spliceosome [BR:
dcon03041
]
63716353 (DCS_03710)
Messenger RNA biogenesis [BR:
dcon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
63716353 (DCS_03710)
Spliceosome [BR:
dcon03041
]
Complex B
Other components
Prp19-related factors
63716353 (DCS_03710)
Complex C
63716353 (DCS_03710)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_15
TPR_8
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
63716353
NCBI-ProteinID:
XP_040656059
UniProt:
A0A151GHW4
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All DBs
Position
02:complement(<1765460..>1768020)
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AA seq
820 aa
AA seq
DB search
MGVAVEAVVRQMGPDLHVVASEDSVYEQDILRDGASAKPWLTYINLKLRSGTIFEQNLVM
ARACAQLPRSYKLWKLFLSFRMKHLAKLNPVIFAAEFRKVNALFEKSLTLLHKMPRIWEM
YLQFLMQQPVLTITRRTFDRALRSLPLTQHDRIWTLYLTFANAASSETAVKVWRRYVQVH
PEDAEDFIELLVGTGAYTEAGRLFIDLLNNSRFSSKHGKAHYELWSEMIDILVENAPEID
TEHETGLNVERIIRSGIARFTDRRGKLWCGLATYWIRRSSFERARDTFEEGLTTVMTVRD
FTLVFDSYVEFEESVIGTLMDVTSVRAEKGIPDEDADFELDLRMMRFEHLMDRRPFLLND
VLLRQNPNNVLEWEKRVALWGENKAEAVQTYTDAIAAINPNRALGSFHSLWANYARLYEK
GGDLRNARVVLEKAVKVPFKSVSELADMWVEWAEMELRNENFDDAVRIMAKAVQAPRRST
VDYFDETLSPQQRVHKSWRLWSFYVDLVESVSTLEEVRKVYERIFELRIATPQTVVNYAN
LLEEHQYYEESFKVYERGLDLFSYPVAFELWNLYLTKAVDRKIGMERLRDLFEQAVENCP
PKFAKIIYLMYGNLEEERGLARHAMRIYERATRAVADEDRADMFIFYITKSASNFGLPST
RPIYERAITSLPDLEAKGMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTNADFWTKWE
QFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQALARSQQRTDTRNEMSDVMTMSEA
SEIDVKVPEGFVASSSAPAGGTGVQAASDLVPNPDVIDLD
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttgcagtagaagctgttgttaggcaaatgggacctgatttgcatgttgttgcc
agtgaagactctgtttacgaacaagacatcctccgtgatggggctagtgctaagccttgg
ttgacatacatcaaccttaaacttcgaagcgggactattttcgagcagaatttggtcatg
gcacgcgcatgtgcccagctaccacggtcgtataaactctggaagctctttcttagcttc
aggatgaagcacctggccaagctgaatcctgtcatatttgcggcggagttcaggaaggta
aacgctctatttgagaagtccctcacccttcttcacaagatgccacgaatttgggaaatg
tatctccaatttctcatgcagcaacctgttctcacgatcacacgacgaacctttgaccga
gcactgcgatcgcttccattaacacagcacgatcgtatttggaccctttatctcaccttt
gccaatgctgcttctagtgagacagctgttaaggtttggagacgatatgtgcaggtgcac
ccagaagatgccgaagacttcatcgaactactagtgggaaccggcgcatacacagaggct
gggagactattcattgacctactcaacaactcacgcttttctagcaagcacggaaaggct
cattacgagctttggagtgagatgattgatatactggtagagaatgcgccagaaatagac
acggagcacgaaacggggctgaatgttgaacgcataattcgaagtggaattgcccgattt
accgatcggagaggtaaactctggtgcggtttggctacttactggattcggcggagcagt
ttcgaacgagctcgagacacgttcgaagaaggcctgacgactgtaatgacggtcagagac
ttcacccttgtcttcgattcctacgtggaattcgaggaatcagttattggtacccttatg
gacgttacatccgtccgagctgaaaagggaataccggacgaggacgcagactttgagctt
gaccttaggatgatgcgctttgaacatttgatggatcgccgcccctttcttctcaatgac
gttctcttacgccagaacccgaacaatgttctcgagtgggagaagcgagtagcgctctgg
ggcgagaacaaggcagaggcagtgcagacctacactgatgcaattgccgccatcaacccg
aatcgagcattagggtcctttcactctctttgggccaattacgctcggctctacgaaaaa
ggcggcgatttacggaatgcacgagtagtcctggagaaggctgttaaggtgcccttcaag
tcggtcagtgagttggcagacatgtgggtcgaatgggcagaaatggagctccgcaatgag
aatttcgacgacgcggttcgaataatggcaaaggctgtccaagcccccagaagatctacc
gtggactacttcgacgagacgctatccccgcagcagcgagtgcacaagagttggaggctt
tggagcttttatgtggacctcgtggaaagtgtatccacattggaggaggtgcgcaaggtc
tacgagaggatatttgagcttcggatcgccacgccacagacagtggtgaactatgccaac
cttctggaggagcaccagtactacgaggagtcattcaaagtgtacgaacgtggcctggac
cttttcagctaccctgtggcctttgagctgtggaacttgtatctgacgaaagctgtggac
cgcaaaatcggcatggagcgattgagagacttgtttgagcaagcagtcgaaaactgtccg
cctaagtttgccaagatcatctatctgatgtacggtaatctggaggaggaacgaggtctt
gcgcgtcacgccatgcgcatatatgagagggcaacacgagctgttgcagatgaggatcgt
gccgatatgttcatcttttatattaccaagtctgcgtccaactttggtcttccctcgacg
cgaccgatctacgaaagagctatcacgtctctcccggatctagaggccaagggcatgtgc
ctcaagtttgcagatatggaaaaacggctgggagaaatcgaccgggcgcgagcaatctac
ggtcatgcctcgcaattttgcgaccccagaacaaatgccgacttctggaccaagtgggag
caattcgaggtgcaacatggcaatgaggataccttcaaagaaatgctgcgaatcaagcgg
agtgttcaagcgcagtacaacacggacgtcaactttatcgcatctcaagccttagctcgg
agccagcagcgaaccgacacccgcaacgagatgtcggatgttatgacgatgtcagaagca
tctgaaatcgatgtgaaggtaccggaggggttcgtagcttctagttctgcgccagcagga
ggtaccggggtgcaagctgcatctgacttggtaccgaacccggatgtgattgaccttgat
tga
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