Drechmeria coniospora: 63717988
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Entry
63717988 CDS
T11322
Symbol
DCS_05345
Name
(RefSeq) Regulator of nonsense transcripts 1
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
dcon Drechmeria coniospora
Pathway
dcon03013
Nucleocytoplasmic transport
dcon03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
63717988 (DCS_05345)
03015 mRNA surveillance pathway
63717988 (DCS_05345)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcon03019
]
63717988 (DCS_05345)
Enzymes [BR:
dcon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
63717988 (DCS_05345)
5.6.2.5 RNA 5'-3' helicase
63717988 (DCS_05345)
Messenger RNA biogenesis [BR:
dcon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
63717988 (DCS_05345)
mRNA cycle factors
Common to processing body (P body) and stress granule
63717988 (DCS_05345)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
DEAD
ATPase
UvrD-helicase
PIF1
NPHP3_N
SLFN-g3_helicase
Viral_helicase1
NAT10_TcmA_helicase
nSTAND3
AAA_22
AAA_16
AAA_25
PhoH
SRP54
AAA_10
zf-B_box_Trim66
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
63717988
NCBI-ProteinID:
XP_040657684
UniProt:
A0A151GMV9
LinkDB
All DBs
Position
02:<8104281..>8107623
Genome browser
AA seq
1087 aa
AA seq
DB search
MEGAFTHVGNHLISDSAAAINAGADDLSALDPDESLLYGNSDAAGRRRRANDDDNQTDAF
DDDDNDSLSSVPVDGMMGMRLREADEKKHLPAHACAYCGIHSPACVVKCLTCNKWFCSAR
GNGTSTHIVNHLVRARHKEVQLHPESALGDTVLECYNCGTKNAFLLGFIPAKSDTVVVLL
CRQPCAANTSNKDMNWDISRWEPLIEERAFLPWLVSPPSDAEQLRARHLSPNTMAKIEEM
WKVNVNATLVDLEKAANIDDDPDPVLLHYEDPYHYQNIFGPLVKMESDYDKKLKEAQSED
ALVVRWDYGLNNKHLVSFNLQKIESGDVKLAVGDEMRLRYNGELRDPWEGVGYVIKIPNS
QSDEVCLELRKTGNEKLVPTDLSHNFSADYVWKATSYDRMQLAMKNFAIDDMSVSGYIFH
VLLGHEVQLQPMKASQPKKWSAPGLPDLNQSQVDAIKSVLQNPISLIQGPPGTGKTVTSA
TIIYHLARTTGNQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVESSVSFLALHE
QVRMAEHNTELVKLSQLKNDVGELSSQDEKKFKQLTKLAEREILQNADVVCCTCVGAGDP
RLSKMKFRNVLIDESTQSAEPECLIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQS
LFERLINLELSPIRLNTQYRMHPCLSEFPSNMFYDGALQNGITHEQRIRKDVDFPWPVAE
MPMMFWSNLGHEEISTSGTSYLNRTEASNVEKTVTRFFKAGVKPGEIGVITPYEGQRSYI
VSTMQNSGHYKKELYKEVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVAL
TRAKYGLVILGNPKVLSKHELWHSLLVHFKDRKCFVEGPLTNLQTCLLQFGRPRVSYRQK
NNSYQQQSQQPSTGFPNGRHNGGAPGRDFDAGSMMSYIPDDVSSVQGSAFGGGAALHSAF
PPMFSSFQAEQWPGLPGVPAPGRGGKARGRAAESVAGESVANSELTDATSSVLGGKGVGQ
GGVSLGAGLHDVVTGMRPVTYTQSDRLKKYVESNGRMTQAGGYGRRYDDDEKSVSTAFHS
QVGGGYD
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggccttcacccatgtaggcaaccatctcatctccgactcggccgccgccatc
aacgccggagccgatgacctgtcggccctcgaccccgacgagagcttgctgtacggcaac
tcggacgccgccggccgccgacgccgcgcaaacgacgatgacaaccagaccgacgccttc
gacgacgacgacaatgatagtctcagcagcgtccccgtcgacggcatgatgggcatgcgg
ctgcgcgaggccgacgagaagaaacacctgcccgcccacgcttgcgcttactgcggcatc
cactcgccggcctgcgtcgtcaagtgcctcacgtgcaacaagtggttctgcagcgcccgc
ggcaacggcacctcgacccacatcgtcaaccacctcgtccgcgcgaggcacaaggaggtg
cagcttcaccccgagtcggccctcggcgacaccgtccttgagtgctacaactgcggcacc
aagaatgccttccttctcggcttcatccccgccaagtccgacaccgtcgtcgtcctgctc
tgccgtcagccgtgtgccgccaacacgtccaacaaggacatgaactgggacatttcgcgg
tgggagccgctcatcgaggagcgagccttcctgccctggctcgtgagcccgccgtccgac
gccgagcagcttcgcgcccgccacctgtcccccaacaccatggccaagatcgaggagatg
tggaaggtcaacgtcaacgcgaccctcgtcgacctcgagaaggcggccaacatcgacgac
gaccccgatcccgtcctcctccactacgaggacccttaccactaccagaacatcttcgga
ccgcttgtcaagatggaatccgactacgacaagaagctcaaggaggcccagtcggaggat
gcgctcgtcgtccgctgggactacggcctgaacaacaagcacctcgtgagcttcaacctg
caaaagatcgagtcgggcgacgtcaagctcgccgtgggcgacgagatgcgcctccgatac
aacggcgagctccgcgacccctgggaaggcgtcggctacgtcatcaagatccccaacagc
cagtcggacgaggtctgcctcgagctgcgcaagacgggcaacgaaaagctcgtgccgacg
gatctctcgcacaacttctccgccgactacgtctggaaggccacctcgtacgaccgcatg
cagctcgccatgaagaactttgccatcgacgacatgagcgtctcgggctacatcttccac
gtcctgctcggccacgaggtgcagctgcagcccatgaaggcgagccagcctaagaagtgg
tccgccccgggcctcccggacctcaaccagagccaggtggacgccatcaagtcggtgctg
cagaatcccatcagcctcatccagggtccgcccggcacgggcaagacggtgacgtcggcc
accatcatctaccacctcgcccgcaccacgggcaaccaggtgctcgtctgcgcgccctcc
aacgtcgccgtcgaccagctctgcgagcgcatccaccgcaccggcctcaaggtcgtccgc
ctgacggccaagtcgcgcgaggacgtcgagtcgtcggtcagcttcctcgccctgcacgaa
caggtgcgcatggccgagcacaacacggagctcgtcaagctgtcgcagctcaagaacgac
gtcggcgagctctcgagccaggacgagaagaagttcaagcaactcaccaagctcgccgag
cgcgagatcctccagaacgccgacgtcgtctgctgcacctgcgtcggcgccggcgatcct
cgcctctccaagatgaagtttcgcaacgtcctcatcgacgaatccacccagtcggccgag
cccgagtgcctcatccccctcgtgctcgggtgcaagcaggtcgtcctcgtcggcgaccac
aagcagctcggccccgtcatcatgaacaagaaggcggccaaggccggcctcaaccagtcg
ctcttcgagcgcctcatcaacctcgagctgtcgcccatccgcctcaacacgcagtaccgc
atgcacccctgcctgtccgagttcccctccaacatgttctacgacggcgcgctgcagaac
ggcatcacgcacgagcagcgcatccgcaaggacgtcgacttcccctggcccgtggccgag
atgcccatgatgttctggtcgaacctcggccacgaggagatctcgacgtccgggacgtcg
tacctcaaccggaccgaggcctcgaacgtcgagaagacggtgacgcgcttcttcaaggcc
ggcgtcaagcccggcgagattggcgtcatcacgccgtacgaggggcagcggagctacatc
gtctcgaccatgcagaactcgggccactacaagaaggagctctacaaggaggtcgaggtg
gcctcggtcgacgccttccagggccgcgagaaggatttcatcgtcctctcgtgcgtccgg
tccaacgagaaccagggcatcggcttcctgtcggacccgcgccggctcaacgtggcgctc
acgcgcgccaagtacggcctcgtcatcctcggcaaccccaaggtgctgtccaagcacgag
ctctggcacagcctgctcgtccacttcaaggaccgcaagtgcttcgtcgaggggcccctg
acgaacctgcagacgtgcctgctgcagttcggccggcccagggtcagctaccggcagaag
aacaacagctaccagcagcagtcgcagcagccgtcgaccggcttcccgaacgggcgccac
aacggaggagcccccggccgcgactttgacgccggctcgatgatgtcctacatccccgac
gacgtctcctccgtccagggatccgcctttggcggcggcgccgccctccactcggccttt
ccccccatgttctcgagcttccaggccgagcagtggccgggcctccccggcgtgccggcg
cccggccgcggcggcaaggcgcgcggtcgcgccgccgagagcgtcgcgggcgagagcgtc
gccaactcggagctcaccgacgccacctcgagcgtcctcggcggcaagggcgtcggccaa
ggcggcgtgagcctcggcgccggcctccacgacgtcgtgacgggcatgcggccggtgacg
tacacgcagagcgatcggctcaagaagtacgtcgagagcaacgggcgcatgacgcaggcc
ggcggctacggtcgccggtacgacgacgacgagaagagcgtcagcacggcctttcacagc
caggtcggcggaggctacgactga
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integrated database retrieval system
