Dalotia coriaria (greenhouse rove beetle): 135790522
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Entry
135790522 CDS
T10370
Name
(RefSeq) LOW QUALITY PROTEIN: putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
dcor Dalotia coriaria (greenhouse rove beetle)
Pathway
dcor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135790522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcor03041
]
135790522
03009 Ribosome biogenesis [BR:
dcor03009
]
135790522
Enzymes [BR:
dcor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135790522
Spliceosome [BR:
dcor03041
]
Complex A
U2 snRNP components
U2 related factors
135790522
Complex B
135790522
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
135790522
Ribosome biogenesis [BR:
dcor03009
]
Eukaryotic type
90S particles
Helicases
135790522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
nSTAND3
AAA_19
AAA_22
Cas3-like_C_2
SRP54
Flavi_DEAD
AAA_25
ABC_tran
TsaE
Microtub_bd
T2SSE
AAA_7
ATPase
Motif
Other DBs
NCBI-GeneID:
135790522
NCBI-ProteinID:
XP_065156828
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MSKRRLDVLDPFIKKKREERGISTAVTTAPVKNASQNPLTGLPYTPKYHELFRKRIQLPV
FEYKTEFMKLLDENQCIVLVGETGSGKTTQIPQWCVEFSLTKGTKGVCCTQPRRVAAMSV
AMRVSEEMDVALGQEVGYSIRFEDCSSPKTVLKYMTDGMLLREGMSDPMLDAYQCILLDE
AHERTLATDILMGVLKEVIKQRKDLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEI
FYTPEPERDYLEAAIRTVIQIHMCEEIAGDVLLFLTGQEEIEVACKRIKREIDNLGPDVG
ELKCIPLYSTLPPSLQQRIFEEPPANKANGAIGRKIVVSTNIAETSLTIDGVVFVIDPGF
AKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAYKHEMQDNTYAE
ILRSNLGSVVLQXKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTDLGAV
MAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFLRPNEAKKAADDAKMRFAHID
GDHLTLLNVYHAFKQNMEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRTSTDFT
SKDYYLNIRKALVNGFFMQVAHLERTGHYLTIKDNQVVQLHPSTCLDHKPEWVIYNEFVL
TTKNYIRTVTDIKPDWLLKIAPQYYDLANFPQCEAKRQLEILQTRLESKQFQQGF
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacgtaggctagacgtgcttgacccgttcatcaagaagaaacgagaagaacgc
ggtatatccacggcggtaacgactgcacccgtcaagaacgcatctcagaatccactcact
ggcctgccttacacccccaaatatcatgagctcttcaggaagagaattcaactgcctgtg
tttgagtacaaaactgaatttatgaagctattggatgagaaccagtgcattgtcttggtg
ggtgagactggttctggtaagaccacacagattccacaatggtgtgtggagttttcatta
actaagggcacaaagggtgtgtgttgtacacagcccaggagggtggcagctatgagtgtg
gcaatgagggtttctgaggaaatggatgtggcattggggcaggaagttggttatagcatt
cgttttgaggactgttcatcacctaaaaccgttttaaaatatatgacagacggtatgttg
ctgcgtgagggtatgagcgatccaatgttagatgcataccaatgtatcctgcttgacgaa
gctcacgaacgtacccttgccaccgacatcctaatgggtgtcctcaaagaagtaatcaaa
cagcgcaaagatttaaaattggttattatgtctgccacattggatgccggcaagttccag
cagtacttcgacaacgcacccttaatgaacgtccccggccgaactcatcccgtcgaaatc
ttctacaccccagaaccagagcgtgattatctcgaagcggcaatccgtacggtgattcaa
attcacatgtgtgaagagatcgccggtgacgttttactcttcctcaccgggcaggaagag
attgaagttgcatgcaaacgcataaagcgagaaattgataatttaggaccggatgtcggc
gaattgaaatgcatccctttgtattccacgctgcctcctagtttgcaacagcgtatcttt
gaggaaccaccggcaaataaagccaatggtgccattggtagaaagattgttgtttcaacc
aatattgctgaaacatctttaaccattgatggcgttgtattcgttattgatccaggtttc
gccaagcagaaagtttataatccgcgtataagagtcgagtcattgctggtgtcgccgatt
agtaaagcgtccgcacagcaacgcgctggacgtgctggacgtacacgtccaggaaaatgt
ttccgtttgtatacagagaaggcgtacaaacacgaaatgcaggataatacatacgcggag
attctacgttcgaatttgggttcggtggtgttgcaanttaaaaaattgggtatcgatgat
ttggtccactttgatttcatggatccgccggcgcccgaaacactgatgagagcactggag
ttgttgaattatctagctgcgctggatgacgatggaaacttgactgatttgggtgcggtg
atggccgaatttccgctggatcctcaattggcgaaaatgttgattgccagttgcaaccac
aattgttccaatgaaatcttatctataacggccatgttgtcagtcccacagtgtttcttg
cgccccaacgaagcgaagaaggcagccgacgacgccaagatgcgcttcgcccacattgac
ggcgatcatctcacgctactcaatgtgtaccatgccttcaaacaaaatatggaggatcct
caatggtgttacgataatttcgtaaattatcgttctttgaagtccgctgacaacgttcga
caacaattgtcgcgtatcatggatcgtttcaacctgaaacgcacgtccacggacttcacc
agcaaagattactacttgaacatacgcaaagcattggtaaatgggttctttatgcaagtt
gcacatttagaacgtaccgggcattatctaacaataaaagacaaccaagtagtacaactt
catccatctacgtgtctggaccacaaacctgagtgggtgatttacaatgagtttgttttg
acgaccaagaactatatcagaactgtcacggacatcaaacctgattggttattgaaaatt
gcaccacaatactatgatcttgcgaattttcctcagtgcgaggccaagcgacagctggaa
atcctgcaaacgcgcctggagtcgaagcagttccaacagggtttttaa
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