KEGG   Dalotia coriaria (greenhouse rove beetle): 135794072
Entry
135794072         CDS       T10370                                 
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 3-like
  KO
K12880  THO complex subunit 3
Organism
dcor  Dalotia coriaria (greenhouse rove beetle)
Pathway
dcor03013  Nucleocytoplasmic transport
dcor03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dcor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135794072
  09122 Translation
   03013 Nucleocytoplasmic transport
    135794072
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dcor03019]
    135794072
   03041 Spliceosome [BR:dcor03041]
    135794072
Messenger RNA biogenesis [BR:dcor03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     135794072
Spliceosome [BR:dcor03041]
 Complex C
  Other components
   EJC/TREX
    135794072
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    135794072
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_WDR3_2nd Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st eIF2A Beta-prop_EML DSE1_N Beta-prop_Vps41 Beta-prop_NOL10_N Beta-prop_HPS5 Tricorn_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N RMC1_N WDR90_beta-prop_4th PAC11 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_TEP1_C WD40_RFWD3 TRM82_WD Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_ELP1_1st Beta-prop_WDR41 baeRF_family5 PD40
Other DBs
NCBI-GeneID: 135794072
NCBI-ProteinID: XP_065161288
LinkDB
Position
Unknown
AA seq 321 aa
MYTEKIDELQKYFKAHNEFKVYTGHSSKVHSVGWSCDGKRLASGSFDKSVCIHTLHRDNI
VKETVFKGHGGSVDQLCWHQTNPNLLSTASGDKTVRIWDTRQSKCVAVIPTKGENINITW
APNGETIAVGNKEDLVTFIDTKTNKIKTEEQYNFEVNEISWNNTSDLFFLTNGQGCIHIL
SYPDLELQHILNAHPGTCICIEFDPTGKYFATGSADALVSLWDINELACKKVFTRMDWPV
RTISFSHDGLLLASASEDLLIDIGFVETGDKIAHIAVDAATFTVAWHPSQYLLAYACDDK
DSYDRKRDAGTLKVWGWSSDN
NT seq 966 nt   +upstreamnt  +downstreamnt
atgtacaccgaaaaaatagacgaactgcaaaaatacttcaaagcgcacaacgaattcaaa
gtctacaccggacactcatcaaaagtgcattcagtcggttggagttgtgatggcaaacgc
ttagcgtccggctcctttgacaaatcagtctgcattcatactttacaccgcgataacatc
gtaaaagaaaccgtatttaaaggtcacggaggctcagtagatcaattatgctggcatcaa
acaaatccaaatttactaagcactgccagcggcgataaaaccgtccgcatttgggacacc
aggcaatcaaaatgtgttgcagtcattccaacaaagggagaaaatatcaatataacatgg
gcacctaatggagaaacaattgcagtaggcaacaaagaagatttagtgacattcattgat
acaaaaactaacaagataaagactgaggagcagtacaactttgaagttaatgaaatttca
tggaacaataccagtgatctcttctttttgaccaatggacaaggatgcatccacatttta
agttatcctgacttagaactgcaacacatcttgaacgcacaccccggcacatgtatctgc
atagaattcgacccgaccggtaaatatttcgctactggcagcgccgacgcattagtatcc
ctctgggacatcaacgaattggcgtgtaaaaaagtattcacacgcatggactggcccgta
cgcacgatatccttcagccacgacggtctcctcctagcatcagcctccgaagatttacta
atagacattggtttcgtcgaaaccggcgacaaaatcgcgcacatcgcagtcgacgcagct
acattcacagtcgcatggcatccatcgcaatatttactcgcgtatgcatgcgatgataaa
gacagttatgatcgtaaacgcgacgcagggactttgaaggtgtggggatggtcgagcgac
aattaa

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