Dalotia coriaria (greenhouse rove beetle): 135798224
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Entry
135798224 CDS
T10370
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
dcor Dalotia coriaria (greenhouse rove beetle)
Pathway
dcor03020
RNA polymerase
dcor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dcor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
135798224
09124 Replication and repair
03420 Nucleotide excision repair
135798224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcor03021
]
135798224
03400 DNA repair and recombination proteins [BR:
dcor03400
]
135798224
Enzymes [BR:
dcor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135798224
Transcription machinery [BR:
dcor03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
135798224
DNA repair and recombination proteins [BR:
dcor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
135798224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
135798224
NCBI-ProteinID:
XP_065167065
LinkDB
All DBs
Position
Unknown
AA seq
1901 aa
AA seq
DB search
MATLDSKAPLRTVKRVQFGILSPDDIRRMSVTEGGLRFPETMEAGRPKLGGLMDPRQGVI
DRNSRCLTCAGNMTECPGHFGHIDLSKPVFHVGFVTKTIKILRCVCFYCSKLLVSPNNPK
IKEVVIKTKGQPRKRLAFVYDLCKGKNICEGGDEMDVGKEGEDLNQAGKKPGHGGCGRYQ
PNIRRSGLDLTAEWKHVNEDSQEKKIAFSAERVYEILKHIIDEECFILGMDPKFARPDWM
IVTVLPVPPLPVRPAVVMYGSAKNQDDLTHKLADIIKSNNELQRNEAAGAAAHVISENIK
MLQFHVATLVDNDMPGMPRAMQKSGKPLKALKARLKGKEGRIRGNLMGKRVDFSARTVIT
PDPNLRIDQVGVPRSIAQNLTFPEIVTPFNFDKMLELVQRGNSQYPGAKYIVRDNGERID
LRFHPKPSDLHLQCGYKVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSC
TSPYNADFDGDEMNLHVPQSMETRAEVENLHITPRQIITPQANQPVMGIVQDTLTAIRKM
TKRDVFITKEQMMNILMFLPIWDGKMPRPAILKPTALWTGKQIFSLIIPGNVNLIRTHST
HPDDEDEGPYKWISPGDTRVMVEHGELVMGILCKKTLGTSAGSLLHICMLELGHEVCGRF
YGNIQTVVNNWLLLEGHSIGIGDTIADPQTYIEIQKAIHKAKEDVIEVIQKAHNMELEPT
PGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACV
GQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLI
DTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGEDGLCGEMVEFQSLPT
VKLSNKAFEKKYRFEPGNEKYLRRVFNEDVIKVMMGSGDVISELELEWEQLQKDREALRQ
IFPSGESKVVLPCNLQRMIWNVQKIFHINKRAPTDLSPLRVIQGVRELLVRCVIVAGSDR
LSVQANENATLLFQCLVRSTLCTKYVSEEYRLSTEAFEWLIGEIETRFQQAQANPGEMVG
ALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGAAA
RDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIPEDQEFVNVYYEMPDFDPTRIS
PWLLRIELDRKRMTDKKLTMEQIAEKINLGFGDDLNCIFNDDNAEKLVLRIRIMNSDDSK
FGEGADEEIDKMEDDMFLRCIESNMLSDMTLQGIEAISKVYMHLPQTDAKKRIVITETGE
FKALAEWLLETDGTSMMKVLSERDVDPVRTYSNDICEIFAVLGIEAVRKSVEKEMNAVLQ
FYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAAAHAE
VDPMRGVSENIIMGQLPRMGTGCFDLLLDAEKCKMGIAIPQTAAGDLMSSGMFFGSAATP
SMSPGTTMTPWNQGATPFAAGGSVWSPQNYLGSGMTPGGPAFSPSAASDASGMSPGYXWS
PTPQXPAMSPMMASPRGASPSYSPASPSYQPHSPSITPVSPSYSPSSPGYSPSSPNYSPT
SPSYSPTSPGYSPTXPSYSPTSPNYSPTSPGYSPASPSYSPTSPNYSPTSPGYSPSSPSY
SPTSPSYSPTSPGYSPTSPGYSPTSPGYSPTSPNYSPAASPGYSPTSLSYSPTSPSYSPN
SHNYSPSPRYTPASPSYSPTSPSYSPSSPNYSPTSPSFSPSSPNYSPTSPGYSPTSPSFA
GGSPQYSPTSPNYSPSSPQHTPAASSRYSPSSPNYSPTSPGYSPTSPQYSPQSTKYSPTS
PTYTPMSPTFSPASPTYSPQPPRYSPSSPNYSPTSPNPDQD
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgctcgacagcaaggctccgcttcggaccgtcaaaagagtgcagttcggcatc
ctcagtccagatgatattcggcgtatgtcggtcaccgagggcggcctccgcttcccggag
accatggaggccggccggcccaagttgggcgggctgatggacccgcgacagggtgttatt
gatagaaactccagatgcctcacttgcgcaggcaacatgactgaatgccccggacacttt
ggtcacatcgatttatcaaaaccggtgtttcacgtcggattcgtcacgaaaacgattaaa
atcctgcgatgcgtctgcttctactgcagcaaactacttgtaagcccaaataatcctaaa
attaaagaggttgtcattaaaaccaaaggccaaccacgaaaacgtttggcatttgtttat
gatttatgcaaaggcaaaaacatttgcgagggtggtgatgaaatggacgtaggtaaagaa
ggcgaagacctaaaccaggctgggaagaaacccggacatggcggttgcggtcgttatcag
ccaaatatccgccgttctggcttagatctcacagccgaatggaaacacgtgaatgaagat
tcccaagagaaaaaaatcgcgttttctgcggagcgtgtgtatgaaattctaaaacacatc
atcgatgaggaatgcttcattttgggcatggatccgaaattcgcgcgtcctgattggatg
attgtcacagttttacctgtgccaccacttccggtgcgtcctgctgttgttatgtatggt
tccgcgaagaatcaggatgatttgacgcataaactcgctgatatcatcaaatccaacaat
gagttgcagcgtaatgaggctgccggtgctgcagcgcatgtaatcagcgagaatatcaag
atgttgcagtttcacgttgcgacactggttgataatgacatgccaggtatgccgcgggcg
atgcagaagtctggtaaacctttgaaagcgctcaaggcgcgtctcaagggcaaggaaggt
cggattcgtggtaatcttatgggcaaacgtgtggatttctccgcgcgtactgtcatcaca
ccagatcccaatctacggattgatcaagttggtgttccgaggtcaattgcgcaaaatttg
acctttcccgaaatagttacaccgtttaattttgacaaaatgttggagttggttcaaaga
ggtaattcacaataccccggagcgaaatacatcgtccgtgataatggcgagcgtattgat
ctgcgtttccatccgaaaccctcggatttgcacttgcagtgcgggtataaagtggagcgg
cacattcgtgatggcgatttggtcattttcaaccgccagcccaccctgcacaagatgagt
atgatggggcacagggtgaaggtgctgccttggtctacgtttcgcatgaatctcagttgt
acatcgccgtacaatgcggatttcgacggggatgagatgaatctgcatgtgccacagagc
atggagacgcgtgcagaggtggaaaatctacatattacacccagacagattattacaccc
caggccaatcaacctgtcatgggtatcgtccaagataccctcacagccatcagaaaaatg
accaaacgtgacgtattcatcaccaaagaacaaatgatgaacatcctcatgttcctacca
atctgggacggtaaaatgccacgtccagccatcctgaaaccaacagctctatggacaggc
aagcagatcttctctttaatcatccctggtaatgtaaacctcatccgtacacattccaca
caccccgacgatgaagacgaaggtccctacaagtggatctcaccgggagacacacgcgta
atggtcgagcacggcgaacttgtcatgggcatcctctgtaagaaaaccctaggtacatcc
gcaggatccctgctgcatatttgtatgctggagttggggcatgaggtgtgcgggcggttc
tacggcaatattcaaaccgtagtcaacaattggttgctcttggagggtcatagcattggt
attggtgacaccattgccgatccgcagacgtacatcgagatccagaaggctattcataaa
gctaaggaggatgtaatagaagtcatccaaaaggcacacaacatggaactggaacccaca
ccaggtaacactttacgacaaacatttgaaaatcaagtaaatcgtatcctgaatgacgct
cgtgataaaaccggtggttctgcaaagaaatcactcacagaatataataacctaaaggct
atggtggtgtcaggatcaaaaggatccaatattaatatatcacaggttattgcctgtgta
ggacaacagaacgttgaaggaaagcgaattcccttcgggtttcgtaaacgtacattacca
catttcatcaaagatgattacggtcctgaatcgcgtggtttcgttgagaattcatatctc
gccgggttgacaccttcggagttttatttccacgctatgggtggtcgtgaaggtctcatt
gataccgctgtcaagaccgctgagactggttacatccagcgtcgtctcatcaaggctatg
gagtctgtcatggtcaactatgatggcaccgtgcgtaactctgtcgggcagctgattcaa
ttgcgttatggtgaggatgggctatgtggagagatggtagaattccaatctctacccaca
gtgaaactaagtaataaagctttcgagaaaaagtacagatttgaaccgggtaatgaaaaa
tacttacgacgcgtattcaatgaagatgttattaaggttatgatgggttccggtgatgta
atatccgagttggagttggagtgggagcagctgcagaaagatcgtgaagctctccggcag
attttccccagcggggaatccaaggtggtactaccatgtaatctccagcgcatgatttgg
aacgtgcagaagattttccatattaataaacgtgcgccaactgatttgtcgccgttgcgc
gtgattcaaggcgtgagggagttgctggttcgctgtgtgatcgtcgctggctcggatagg
ctgtcggtgcaagccaatgagaacgcgacgttgttgtttcagtgccttgtgcgctccacg
ctctgcacgaaatacgtctcagaggagtacaggttgagcaccgaggcgttcgaatggttg
attggtgaaatagaaactcgtttccagcaagcacaggctaatcccggggaaatggtgggg
gccctggctgcgcagtcgcttggtgagcctgcaacccagatgacactcaacacctttcat
tttgctggtgtgtcttcaaagaacgtaacacttggtgtgccgcgtttgaaggaaattatt
aatatttcgaagaaacccaaggcgccgtcactcacggtgtttttgactggtgcagctgcg
cgtgatgcggaaaaagcgaagaatgtcctttgtaggttggaacacacaacgctacgcaaa
gtgacagctaacacagcgatttactatgatccagatccacagaatacggtgattccagag
gatcaagagtttgttaatgtttattatgaaatgcctgattttgacccgacgaggatctcc
ccgtggttgctgcgtattgaattggatcgcaaacgcatgactgataagaaattgaccatg
gaacaaatcgccgagaagattaatcttggtttcggcgatgatctcaactgtatcttcaac
gatgataacgctgagaagttggtgctgcgcatacgcatcatgaattcagatgatagtaag
tttggagagggcgctgatgaggagatagacaaaatggaggatgatatgttcctgcgttgt
attgaatccaacatgctttcggatatgacactgcagggtattgaagccattagtaaagtg
tacatgcatctaccacaaaccgatgctaagaaacgtattgttatcaccgaaacaggtgaa
tttaaagcgctggctgaatggttgttggaaacggacggtaccagcatgatgaaagtcctt
tccgaacgtgatgttgatccagtccgtacgtattccaacgatatctgtgagattttcgct
gtgttgggcattgaagccgtgcgaaaatccgtggagaaggaaatgaacgccgtgctgcag
ttctacggtctgtacgtaaactaccgccatctggcgttgttgtgtgatgttatgacggcc
aaaggtcatcttatggcaattacacgtcacggtatcaacaggcaggataccggcgcgctt
atgaggtgttcttttgaggaaaccgtcgatgtgcttatggatgccgctgcgcatgcggag
gtggatccaatgcgtggtgtatctgagaatattatcatgggtcagctaccgcgcatgggc
actggttgttttgatttactcctggatgctgagaagtgtaagatgggtattgctataccg
caaacagctgccggtgatttgatgtcaagcggtatgttcttcgggtctgcagcgacacct
agcatgagtccgggtactacaatgacaccttggaatcaaggcgcaacgccatttgcagct
ggtggaagtgtttggtcaccgcaaaattacttgggcagtggtatgacaccaggtggccct
gctttctcaccatcagctgcttcggatgcttctggaatgtctcctgggtacncctggtca
cccacaccgcaantccccgctatgtcaccgatgatggcgtcccctcgcggagcttcccca
tcgtacagccctgcatcaccctcgtatcaaccacattcaccgtcgattacaccggtttca
cctagttactcaccaagcagtcctgggtattctccctcctcaccgaattacagcccaacg
agtcctagttactcgccaacatcgcccgggtattctccgactntcccgagctattcacca
acttcccctaactattcccccacctcccctgggtattcaccggcttctcctagttattca
cccacgtctcctaattattctccaactagtcctggttattctccatccagtcctagttac
tcacctacatctccgagttattcaccaacttcgccagggtattctcctacatccccgggg
tattcccctacttcccctggttattccccaacatctccgaattattcacctgctgcctca
ccgggttattctccaacttcgttgagttattcccccacttctccaagttactctccgaat
tcacataactattcgccatctcctagatatacacctgcatccccgagttattcgcccact
tcaccgagttattcgccatcctctccgaattactcccctacttcacctagtttctcacct
tcatcgccgaattattcgccaacatctccgggttattctccgacttccccgagctttgcc
ggtggaagcccgcagtattcccccacctctccgaattattctccatcctcaccgcagcat
accccggcggctagttcacggtattcgccgtcctcgccgaactattcccccactagtccg
ggttattcacctacgtcaccgcagtactctccgcaaagcactaagtactcgcccacgtcg
ccgacgtacactccgatgagtcccacgttttcgccggctagccctacgtactcaccgcag
ccgccgcgatattcaccatcgagcccgaactattcgccgacaagtcctaatcctgaccag
gactaa
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integrated database retrieval system
