Dalotia coriaria (greenhouse rove beetle): 135800205
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Entry
135800205 CDS
T10370
Symbol
l(3)72Ab
Name
(RefSeq) U5 small nuclear ribonucleoprotein 200 kDa helicase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
dcor Dalotia coriaria (greenhouse rove beetle)
Pathway
dcor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135800205 (l(3)72Ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcor03041
]
135800205 (l(3)72Ab)
Enzymes [BR:
dcor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135800205 (l(3)72Ab)
Spliceosome [BR:
dcor03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
135800205 (l(3)72Ab)
Complex C
U5 SnRNP specific factors
135800205 (l(3)72Ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
WHD_SNRNP200
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_30
AAA_22
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
135800205
NCBI-ProteinID:
XP_065169439
LinkDB
All DBs
Position
Unknown
AA seq
2137 aa
AA seq
DB search
MADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVMSLSGKLLGTRMGDRAQRTR
PGKAEERKVKRQKRDEAQYDFTRMKGATLLSEGVDEMVGILYRPKTQETRQTYEVLLSFL
QEALGDQPRDILCGAADEVLTVLKNDRLKEREKKKEAESLIGNIADERFALLVNLGKKIT
DFGSDDTKTANTGDDNIDEQYGINVQFEESEEEDDEDMFGEVREELDEEEGEEAREDGAI
HAENLGGVEEMKKEKPLHPLDIDAYWLQRRLSKIYDDAMVSHAKANEVLTVLKDANDDRE
CENQLVLLLGYDCFDFIKQLKKHRQMILYCTMLAKSQSESERQKIREQMVEDSSLSKILK
VLDTGKDDDDDDGDAGARSSNRKSTANDSDMGAGGNVPGSRQVIDFEDLVFAQGSHFMAN
KRCQLPDGSFRKQRKGYEEVHVPALKPKPFADTEKLKPIDELPKYVQPVFDGFRTLNRIQ
SRLCKTALDSDENLLLCAPTGAGKTNVALLTMMREIGKHINDDGTINADEFKIIYVAPMR
SLVQEMVGNFGKRLASYNLTVSELTGDHQLTREQIADTQVIVCTPEKWDIITRKGGEKTF
TSLVRLIIIDEIHLLHDERGPVLEALVARTIRMIEATQEDVRLVGLSATLPNYQDVATFL
RIKPETGLFHFDNSYRPVALEQQYIGVTEKKALKRYQVMNEIVYEKTMEHAGKNQVLIFV
HSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEAEQVKNQELKDLLPYGFAIH
HAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELS
ALDVLQMLGRAGRPQYDTKGEGILITNHSELQYYLSLLNQQLPIESQLISKLPDMLNAEI
VLGTVQTVKDAVTWLGYSYLYIRMLRQPTLYGISHDHTKDDPLLEFHRGDIVHTAALHLD
RSGLIKYDRKTGQFQVTELGRIASHYYCTHETMSTYNQLLKPMLSEIELFRVFSLSGEFR
NIAVREEEKIELQKLMERVPIPIKESIEEPSAKVNVLLQAYISQLKLEGFALMSDMVYVT
QSAARLMRAIFEIVLHRGWAQLTDKTLALCKMIDKRMWQSMSPLRQFRKMPEEIVKKIEK
KNFPWERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELSTHIQPITRSTLRVELTIT
PDFQWDDKLHGASEGFWILVEDVDSEEILHSEYFLLKAKFAQDEHLIKFFVPVFEPLPPQ
YFLRVVSDRWIGAETQLPVSFRHLILPEKNFPPTELLDLQPLPVTALRNPKYEAMYTEKF
PQFNPIQTQVFNAVYNSDDNVYIGAPSGSGKTAIAEFAILRLFQNNPEGRCVYLVPEEAL
ADLVFADWHNKFGQVLGKKVVLLTGETGTDLKLLAKGQVVITTAEKWDILSRRWKQRKNV
QNINLFIVDELHLIGGEDGPVIEVVCSRMRYISSQIEKPIRIVALSSSLTDYKDVAQWLG
CNANCTFNFHPSVRPVPLELHVQGLNITHNASRMIAMSKPVYNAIVRYSTHRPVIIFVPT
RRQARLTAIDMLTYAAAESQPNRFFHAEEEDIKPFLDRMTDKTLKETLSQGVAYMHEGLT
ASDHRLVEQLFDSGAVQVAVVTRDLCWGVNIFAHLVIIMDTQFYNGKVHAYEDYPVTDVL
QMVGRANRPLDDDDAKCVLMCQSSKKDFFKKFLNDSLPVESHLDHRMHDHFNAEIVTKTI
ENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRHLSDHLSELVENTLSDLEQSKCISIE
EEMDTLPLNLGMIAAYYYINYTTIELFSLSLNSKTKIRGLLEIISSAAEYEDLPVRHHED
NLLRTLSQRLPNKLTNSSGGQPKYNDPHIKTNLLLQAHLCRLQLGAELQGDTEIVLSKAI
RLIQACVDVLSSNGWLSPAVAAMELAQMVTQAMWSKDSYLKQLPHFTNDIIKRCTDKNVD
TVFDIMELEDDDRSKLLQLSDAQMADVAKFCNRYPNIEMSYEVLEKDHIRSGSSVHVAVQ
LEREDEVTGPVIAPFYPQKREEGWWVVIGDAITNSLLSIKRLTLQQKARVKLDFVAPSPG
HHGYTLYFMSDAYLGCDQEYKFTIEVGEFESSASDSE
NT seq
6414 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgctgcggcgcggcaacttcaatatgaatataaagcgaattcaaatttggtc
ctacaagccgatgtccgtcttatcgagcgtagaagtcgcgatgaagccaccggcgaggtc
atgtccctttcgggcaaactcctggggacacgaatgggtgatcgcgctcagcgtacacga
cccggcaaggcagaagaacgtaaagtgaagcgtcagaagcgcgatgaggcacaatatgat
ttcacacgcatgaagggcgctacgcttttatctgaaggtgtcgatgaaatggttggcatt
ctttatcgtcctaaaacacaggaaactcgccagacttatgaagttctactgagttttcta
caggaagcacttggtgatcaaccaagggacattctctgtggtgctgctgatgaggtactc
acagtgttaaagaatgaccggttgaaggaacgcgagaagaaaaaggaagcggaatctttg
atcggtaatattgcagatgaacgttttgcattattagtgaatctgggtaagaagatcact
gattttggcagtgatgacacaaaaaccgctaacacaggcgatgataatattgatgagcag
tatgggatcaatgtacaatttgaagagtctgaagaggaagatgatgaagatatgtttggt
gaagtcagggaagaattagatgaggaggaaggtgaggaagcaagagaagatggagctatc
catgcagaaaatttaggtggtgttgaagagatgaagaaggaaaaaccgctccatccgttg
gatatcgacgcatattggctacagcgaagattgtctaaaatctatgatgatgccatggtg
tcacatgcaaaagcaaatgaagttttgactgttttaaaagatgctaatgatgatagagag
tgtgagaatcaacttgtcttactcttgggttacgattgttttgatttcatcaaacaattg
aagaaacacagacaaatgattttatactgcacgatgttagcaaagtcacaaagtgaatca
gaaagacaaaaaatacgcgaacaaatggtagaggacagtagtctatccaaaattctaaaa
gttttggacaccggtaaagatgatgatgacgatgatggcgatgccggagcgcggtcatca
aaccgtaaaagcacagcaaatgacagcgatatgggcgccggtgggaatgtccctggttcc
cgacaagtaatagattttgaagatttagtcttcgcgcaaggcagccatttcatggcgaac
aaacgatgtcaactacctgatggttcattccgaaaacaacgcaaaggatacgaagaagta
cacgtcccagcgttgaaacccaaaccatttgcagacactgaaaaattaaaaccaatcgat
gagctgccaaaatacgtccaacctgttttcgatggttttagaacattgaatcgcattcag
agcaggctgtgtaaaactgcactggactccgatgagaatctattgctttgtgcgccgact
ggtgcgggtaaaaccaatgtagcgctgttgactatgatgcgtgagattggcaaacacatt
aatgatgatggtacaatcaacgcggatgagtttaaaattatttacgtcgcgcccatgcgg
tcattagtacaggaaatggttggaaactttggcaaacgtcttgctagttataatttgact
gtttctgaattgactggtgatcatcagctgacaagagaacagattgcagatacgcaagta
attgtctgcactcctgaaaagtgggatattattactcgtaaaggtggagagaaaactttt
acttcacttgtaagattgatcatcatcgatgaaattcatttgttgcatgatgaacgaggc
ccggtgctggaagctttggtcgcgcgtacgattcgtatgattgaagcaacacaggaagat
gtacgtttagtaggtttatctgctacacttccgaattatcaagatgttgctactttcctt
cgtattaaaccggagactggcctgtttcactttgataacagttacagaccggttgctttg
gaacaacagtacataggcgttacagaaaagaaagccttgaagagataccaggtaatgaat
gagattgtctacgagaaaaccatggagcatgccggtaagaatcaagtgttgatttttgtg
cattcacgtaaagaaaccggaaaaaccgcgcgggcaataagagacatgtgtttagaaaaa
gatactttaggacagtttttgcgagaaggatcagcatccatggaggtgttaagaacggaa
gcagaacaggtaaaaaatcaagagctgaaagatctgttaccatatgggtttgctattcat
cacgctggtatgactagagtggatcgtactcttgttgaagatttgtttgctgatagacac
attcaagtattagtttcgactgcaactttagcttggggtgtcaacttaccagctcacact
gtaatcatcaagggtacgcagatttacaatccggaaaaaggtcgctgggtggagttgagc
gctctggatgtattgcaaatgttgggtcgtgctggtcgcccgcaatacgacaccaaaggt
gaaggtatcttgatcaccaaccacagtgaattgcaatattatctgtcgttgctgaatcaa
cagttgcctatagaatcacagcttatttcgaagttaccggacatgttgaatgctgaaatt
gtgctcgggacagtacaaactgttaaagatgctgtgacttggttgggttattcatatctc
tatattcgcatgcttcggcaacctactttgtatggtatatcacatgatcatactaaagat
gatccgttattagagtttcatcgtggtgatattgttcatactgctgctttgcacttggat
cgcagtgggctgataaaatatgatcgtaaaactggtcagtttcaagttactgaactcggt
cgcattgcttcgcattattactgcacacatgaaacaatgtctacatataaccaacttctg
aaaccgatgcttagcgaaattgaacttttccgcgtgtttagtctctctggggagtttcgt
aatattgcggtgcgtgaagaggaaaaaattgaattacagaaacttatggagcgtgtacct
attccaatcaaggaaagtattgaggaacccagcgcgaaagtaaatgttttattgcaagct
tacatttctcaattaaaactggaagggtttgcattgatgtccgatatggtttatgttact
caatcagccgctcgtttaatgcgtgctatttttgaaattgttttgcatcgtggatgggca
caactcacggataaaacgttggcgttgtgcaaaatgattgataaaagaatgtggcagtcg
atgtctcctctgaggcagtttagaaagatgcctgaggagatcgtgaaaaaaatcgagaag
aaaaactttccttgggagcgactttatgatcttggcccgaatgaaattggtgaattgatc
agagtacccaaattagggaagaccattcataaatatgtgcatcaatttccaaagttggaa
ctatcaacacatattcaaccgattacgagatctacgcttagagttgagttgacaattaca
ccggatttccagtgggatgataaactacatggcgcatcggaagggttttggattttggtt
gaggatgtagattcagaggagattctgcatagtgagtactttctgttgaaggcaaagttt
gcacaggatgaacatttgattaagtttttcgtgccggtgtttgaacctttgccaccgcag
tatttccttagagtggtgtcagatagatggattggtgctgaaacacagctgcctgtatca
tttagacatttgattttaccggagaagaactttccacctacagagttgttggatttacag
ccattgcctgtgacagctttaagaaatcccaagtatgaagcaatgtacactgagaagttt
ccacaattcaatccgattcagacacaagtttttaacgcggtatataattcagatgataat
gtatacattggcgcacctagcggcagtggaaaaaccgctattgctgaatttgctattcta
cgactattccagaataatccagagggacgctgtgtgtatcttgtacctgaggaagcactt
gccgatttagtattcgctgactggcataataaattcggtcaagtactcggtaagaaagta
gttcttctcacaggagaaacaggcacagatctcaagcttttagcaaagggtcaggtggtg
attaccaccgcagaaaagtgggatattctttcgcggcgttggaaacaacgtaaaaatgta
caaaacatcaacttgtttatcgtggacgagttacatttgattggtggtgaggacggacca
gttattgaagttgtctgctctagaatgagatacatttcctcacaaattgagaaacctatt
agaatcgtcgcgttgtcttcgtctctgactgactataaagatgtcgcccaatggttggga
tgcaacgcgaattgcaccttcaatttccatccgagtgtacgtccagttcccttggaattg
cacgtgcaaggcttgaatatcactcataacgcatcgagaatgattgctatgtcaaaaccg
gtgtataacgccattgtaaggtacagcactcatcgcccggtgattatttttgttcctacc
aggagacaagcgaggcttacagctattgatatgttgacatatgccgctgcagagtcacaa
ccgaatcgattcttccacgcagaagaggaagatatcaagccgttcttagatagaatgact
gataagaccctgaaggagactctatcacaaggtgttgcatatatgcatgaaggtctcact
gcaagtgatcatcgattagttgagcaattatttgactctggtgctgtgcaagtagcagtg
gtcacgcgggatctatgctggggtgtaaatatctttgcacatttggttatcattatggat
acacagttctataatggtaaggttcacgcgtatgaagactaccctgttacagatgtactt
caaatggttggaagggcgaatagacctttagatgatgacgatgcaaaatgtgtgttgatg
tgtcaaagctctaaaaaagactttttcaagaaatttttgaatgattctctaccggttgaa
agtcatttggatcatcgaatgcacgatcattttaacgcggaaatcgtgacgaaaactatt
gagaacaagcaggacgctgtggattacttgacgtggacattcctctatcgtagactcaca
caaaaccccaactattacaacctgcaaggtgtcacacatcgtcacctttcagatcatctc
tcggagttggttgagaatacactctcggacttggaacagtcgaaatgtatcagtattgag
gaagaaatggacacgttaccactcaatctcggcatgattgcagcgtattactatattaac
tacaccaccattgaactcttcagtttgtctcttaatagcaagactaaaatccgtggattg
ttggagattatctcttcggcagccgagtatgaagatttgccggtgcgtcatcatgaagat
aatcttctccgtaccctgtcgcaacgtttaccgaataaactgacaaattcatcgggaggt
cagccgaaatacaatgatccgcatatcaagaccaatttattactgcaagcgcatctgtgt
agactgcagttgggtgccgagttgcagggtgatacggaaattgttctttcgaaggcaatt
cggttgattcaggcgtgtgtggatgttctcagctcaaacggctggttgtcaccggcggtg
gcggcgatggagttggctcagatggtgacacaagcaatgtggagcaaggattcgtacttg
aaacaattaccacatttcacaaatgatattattaagcgttgcaccgataagaatgttgat
acagtgtttgatatcatggaactcgaagatgatgatagatctaaacttctgcagttgagc
gatgcacaaatggcggacgtagcgaaattctgcaatcgctatcctaacatcgagatgagt
tacgaggtgcttgagaaagaccacattcgttccggcagttccgtacacgtggctgtgcaa
ctagaacgcgaggatgaagtcactggtccggttattgctccattttatccacagaaacgt
gaggaaggatggtgggtggtgattggcgatgcgataaccaattcattgctttcaatcaaa
cggcttacactacagcaaaaggcgcgtgtcaagttggactttgtggcgccaagtccgggc
catcatggttataccctttatttcatgagcgacgcttatcttggctgcgatcaagagtac
aagttcacaatcgaagtgggcgagtttgagtcgagcgcatctgactccgagtaa
DBGET
integrated database retrieval system
