Demequina capsici: RN607_01760
Help
Entry
RN607_01760 CDS
T10255
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dcp Demequina capsici
Brite
KEGG Orthology (KO) [BR:
dcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcp03032
]
RN607_01760 (topA)
03400 DNA repair and recombination proteins [BR:
dcp03400
]
RN607_01760 (topA)
Enzymes [BR:
dcp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RN607_01760 (topA)
DNA replication proteins [BR:
dcp03032
]
Prokaryotic type
DNA Topoisomerases
RN607_01760 (topA)
DNA repair and recombination proteins [BR:
dcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RN607_01760 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
WNM27756
UniProt:
A0AA96FBI1
LinkDB
All DBs
Position
352098..354779
Genome browser
AA seq
893 aa
AA seq
DB search
MPRKLVIVESPTKSRTIGGYLGDDYDVVSSVGHIRDLAEKSELPDDVKKSPAGEFSIDID
GGFTPFYRVDPGKKKVVADMKKRLKDADELYLATDEDREGEAIAWHLLEVLKPKVPVKRL
AFHEITKEGIARALQSPREVDMELVEAQEARRILDRLYGYSVSPVLWRKIQGGLSAGRVQ
SIALRLVVDRERERIAFRSAEYWDLQATFTAQAGPDAGRAFVARLTTVDGKRVASGKDFD
DRGALKGSTVVHLTAAAAGALAAGLASAEFKVAGVDSKPYKRRPAAPFITSTLIQEASRK
LRLGARDTMRVAQGLYERGYITYMRSDSPGLSGEATRAARSQALELFGSDAVAPTARVYA
SKDSNAQEAHEAIRPSGDVFRTPDQLRAELRGDEFRMYEMIWKRTIASQMADAVGTTSTV
RLAATSAEHHAVEFSKSGTIITQPGFLAVYEESREKARYEEDDAVDKADDDRLPQLTEGQ
PVDVADLQPLTHATTPPPRFTQGSMIKELEDRKFGRPSTYASMVDLIISRGYVRVDKQAL
VPTWLAFAIIRLLEEHFGWLVDYDFTADMEEDLDRIAQGDMARVDWLTRFYFGTEGAAEG
RAEGLKNLVDNLGDIDARAINTFQIGDGIELRVGRYGPYIQRPKEGGEEGEMDTASVPED
LAPDELTVARAGELFENQGGDERALGTHPDLGTEIIAKAGRFGPYVTEVLPEGSKAKPRT
ASLFKSMDLATVTLEDAVKLMELPRVVGKDPESNEEITAQNGRYGPYLKKGTDSRTIDSE
DQLLSITLDEALAIYAQPKRGRGRTAKPPLKELGVDPVSEKPIVVKEGRFGEYITDGVTN
ITIPRGTTVDELTHERAVELLQEKREKAPAKKTAARKPAARKTTTRKAAPKKK
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcaagctcgtcatcgtcgagtcgcccaccaagtcgcgcaccatcggcggctat
ctgggcgacgactacgacgtggtctccagcgtcggccatatccgcgaccttgcggagaag
tcggagcttccggacgacgtcaagaagtcgcctgcaggcgagttctccatcgacatcgac
ggcggcttcacgcccttctaccgggtggacccgggcaagaagaaggtcgtcgcggacatg
aagaagcgtctcaaggacgccgacgagctgtacctggccactgatgaggaccgcgagggg
gaggcgatcgcctggcacctgctcgaggtcctcaagcccaaggtgccggtcaagcgtctg
gccttccacgagatcaccaaggaggggatcgcgcgggccctccagtcgccccgcgaggtc
gacatggagctggtggaggcccaggaggcccgccgcatcctcgaccgactgtacggctac
tccgtgtcgccggtgctgtggcgcaagatccagggcgggctgtccgccgggcgcgtgcag
tcgatcgcgctgcgcctggtcgtggaccgcgagcgggagcgcatcgcgttccgttccgcc
gagtactgggacctgcaggccaccttcaccgcccaggcgggccccgacgcgggccgggcc
ttcgtcgcgcgtctcacgaccgtggacggcaagcgggtcgcgtccggcaaggacttcgac
gaccgtggcgcgctcaagggctccaccgtggtgcacctcaccgccgcggcagccggagcg
ttggccgcgggcctcgcctccgccgagttcaaggtcgcaggcgtcgactcgaagccgtac
aagcgccgtcctgcggcgccgttcatcacctccaccctgatccaggaggcgagccgcaag
ctccggctgggtgcccgagacacgatgcgcgtggcgcagggcctgtacgagcgcggctac
atcacctatatgcgctccgactcgccgggcctgtccggtgaggcgacgcgcgccgcccgt
tcgcaggcgctcgagctcttcggctccgacgccgtcgcacccacggcccgtgtctacgcg
tcgaaggactccaacgctcaggaggcgcacgaggcgatccgcccgtcgggcgatgtgttc
cgcaccccggatcagctccgcgcagagctgcgcggcgacgagttccgcatgtacgagatg
atctggaagcgcaccatcgcctcccagatggccgacgcggtcggcaccacctccacggtg
cgcctcgccgccacgagcgccgagcatcacgcggtcgagttctccaagtccggcacgatc
atcacgcagcccggcttcctcgccgtctacgaggagtcgcgtgagaaggcccgctacgag
gaggacgacgcggtcgacaaggccgacgacgaccgcctgccccagctcaccgagggccag
cccgtggatgtcgcggacctgcagccgctgacgcacgcgacgacgccgcccccgcgattc
acgcagggctccatgatcaaggagctcgaggaccgcaagttcggccgtccgtccacgtac
gcgtcgatggtggacctcatcatctcccgcggctatgtgcgggtcgacaagcaggcgctg
gtgcccacgtggctcgctttcgcgatcatccgccttctcgaggagcacttcggctggctg
gtcgactacgacttcacggccgacatggaggaggacctggaccggatcgcgcagggtgac
atggcccgcgtggactggctcacccggttctacttcggcaccgagggcgccgccgagggc
cgcgccgaggggctgaagaacctcgtggacaacctgggcgacatcgacgcgcgcgccatc
aacaccttccagatcggcgacggcatcgagctgcgcgtcggccgctacggcccgtacatc
cagcgccccaaggagggtggcgaggaaggggagatggacacggcgtccgtccccgaggac
ctcgctcccgacgagctcaccgtggcgagggctggagagctgttcgagaaccaggggggc
gacgagcgtgcgctcggcacccaccctgacctgggcacggagatcatcgcgaaggcgggc
cgcttcggaccgtacgtcaccgaggtgctgccggaggggtccaaggccaagccgaggacc
gcgtcgctgttcaagtcgatggacctcgcgaccgtcaccctcgaggatgccgtcaagctc
atggagctgcctcgcgtggtcggcaaggaccccgagtcgaacgaggagatcaccgcccag
aacggtcgctacggcccgtacctgaagaagggcaccgactcccggaccatcgactccgag
gatcagctgctgtccatcacgctcgacgaggcgctcgccatctacgcgcagcccaagcgt
ggccgtggccgtaccgccaagccgccgctcaaggagctgggagtcgacccggtgtccgag
aagccgatcgtcgtgaaggaaggccgcttcggcgagtacatcaccgacggcgtcaccaac
atcacgatcccccgcggcacgaccgtcgacgagctcacccacgagcgcgccgtcgagctg
ctgcaggagaagcgcgagaaggctcccgcgaagaagaccgcagcgcgcaagcctgcggcc
cgcaagacgacgacgcgcaaggccgcgcccaagaagaagtga
DBGET
integrated database retrieval system
