Demequina capsici: RN607_02045
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Entry
RN607_02045 CDS
T10255
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
dcp Demequina capsici
Pathway
dcp00521
Streptomycin biosynthesis
dcp00523
Polyketide sugar unit biosynthesis
dcp00525
Acarbose and validamycin biosynthesis
dcp00541
Biosynthesis of various nucleotide sugars
dcp01100
Metabolic pathways
dcp01110
Biosynthesis of secondary metabolites
dcp01250
Biosynthesis of nucleotide sugars
Module
dcp_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
dcp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RN607_02045 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RN607_02045 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
RN607_02045 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RN607_02045 (rfbB)
00525 Acarbose and validamycin biosynthesis
RN607_02045 (rfbB)
Enzymes [BR:
dcp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
RN607_02045 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
Sacchrp_dh_NADP
adh_short
NmrA
KR
Motif
Other DBs
NCBI-ProteinID:
WNM27811
UniProt:
A0AA96FAX3
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Position
418959..419957
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AA seq
332 aa
AA seq
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MSHLLVTGGAGFIGSNFVHHVLATTDHTVTVLDALTYAGNRASLDGLPADRFTFVKGDIT
DVAVVDALVKDADAVVHYAAESHNDNSLDNPFPFVHTNLIGTYTLLEAVRKHGKRYHHIS
TDEVYGDLELDDPAKFTETTPYNPSSPYSSTKAGSDLLVRAWVRSFGVQATISNCSNNYG
PYQHVEKFIPRQITNVIRGIRPKLYGAGENVRDWIHADDHSSAVLTILEKGTIGETYLIG
ADGEKNNKDVVELILTLMGQPADAYDHVTDRPGHDMRYAIDSTRLRTELGWAPSFQDFES
GMKATIDWYRAHEAWWAPAKDKTEAFYASKGQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaccttcttgtcaccggaggcgcgggcttcatcggctcgaacttcgtccaccac
gtcctggccacgaccgatcacacggtcacggtcctcgatgcgttgacgtacgcgggcaac
cgcgcgtcgctggacggtcttccagccgaccgcttcacgttcgtcaagggcgacatcacg
gatgtcgccgtggtcgacgccctggtcaaggacgcggacgccgtcgtccactacgcggcg
gagagccacaacgacaactcgttggacaacccgttcccgttcgtccacacgaacctgatc
ggcacctacacactgctcgaggcagtgcgcaagcacggcaagcgctaccaccacatctcc
acggacgaggtgtacggcgacctggagctggacgacccggccaagttcaccgagacgacg
ccgtacaacccgtcgtccccgtactcgtcgaccaaggcgggatcggacctgctggtacgc
gcctgggtgcgttccttcggtgtgcaggccaccatctcgaactgctcgaacaactacggc
ccgtaccagcacgtggagaagttcatcccgcgccagatcaccaacgtgatccgcggcatc
cgacccaagctgtacggcgcgggcgagaacgtgcgcgactggatccacgccgacgaccac
tcctcggccgtgctgaccatcctggagaagggcacgatcggcgagacctacctgatcggc
gccgacggcgagaagaacaacaaggacgtcgtcgagctcatcctcacgctgatgggccag
cccgccgacgcatacgaccacgtcacggaccgccccggccacgacatgcggtacgcgatc
gactccacgcgcctgcgcacggagctcgggtgggcgccgtcgttccaggacttcgagtcc
ggcatgaaggcgacgatcgactggtaccgagcccacgaggcatggtgggcgccggcgaag
gacaagaccgaggcgttctacgcctcgaagggacagtga
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