KEGG   Demequina capsici: RN607_05770
Entry
RN607_05770       CDS       T10255                                 
Name
(GenBank) AMP-dependent synthetase/ligase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
dcp  Demequina capsici
Pathway
dcp00061  Fatty acid biosynthesis
dcp00071  Fatty acid degradation
dcp01100  Metabolic pathways
dcp01212  Fatty acid metabolism
dcp02024  Quorum sensing
dcp04146  Peroxisome
Module
dcp_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:dcp00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    RN607_05770
   00071 Fatty acid degradation
    RN607_05770
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    RN607_05770
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RN607_05770
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:dcp01004]
    RN607_05770
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dcp04147]
    RN607_05770
Enzymes [BR:dcp01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     RN607_05770
Lipid biosynthesis proteins [BR:dcp01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   RN607_05770
Exosome [BR:dcp04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   RN607_05770
  Exosomal proteins of breast cancer cells
   RN607_05770
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: WNM28511
UniProt: A0AA96FHF2
LinkDB
Position
complement(1186912..1188723)
AA seq 603 aa
MTESSRMTTIPLAVQTPPDLTFIALLRQRAAESPQHVYCEHKDRSGTWVPTTLAAFLAEA
EQTAKGLMVMGVGKGDTVGLQCNTRYEWVVMDFAIQAAGAITVPIYPTSSQYQVEGIAND
AELSLIVVENDTHATVARAIDDAPRVLVIDDATAPALATLKAAGAHISDDELAARAEGIT
AEDIATIVYTSGTTGRPKGVALPHRAFVQWPINGAADKDFGTLADGDARLLLFLPLAHVL
ARHVEFLALACGAVLGLSPNPKTLAEDLGTFRPTWIMAVPRVLETFYNVVDARAGGPLRQ
RLFRWAAEVSRDIDRTRQTGRRTLGLHARAWLAKRLVLNKVQHALGGNLRYIVCGGAKLS
ERISHFYGGLAIHVMEGYGSTELAGPMTCNPPSHVKVGSVGRPYPGGAIRIADDGEVLAQ
GSNMFVGYYRNPDATAEAIRDGWFHTGDLGSLDEDGYLTITGRKKEILVTASGKNVQPAC
LEDAIRPYPLVQEVVVVGDGRPFIGALLSIDETMLPSWLKTKGLPTMSVTEAASHPFVKD
HVQGIIDQANALVSRAEAIREWRFLPRELSEKREELSASMKVRRQQVEEHFADVIASIYG
EMR
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgaccgagtcctcgcgcatgacgaccatccccctggccgtgcagacaccccccgacctc
acattcatcgcgctcctgcggcagcgtgcggcggagtctccgcagcacgtctactgcgag
cacaaggaccggtcggggacctgggtgccgaccacgctcgccgccttcctcgcggaggcg
gagcagactgccaagggcctgatggtgatgggagtcggcaagggcgacaccgtgggtctg
caatgcaacacccgctacgagtgggtggtgatggacttcgcgatccaggccgcgggcgcc
atcacggtgccgatctaccccacctcctcgcagtaccaggtcgagggcatcgcgaacgat
gcagagctgtcgctgatcgtcgtcgagaacgacacgcatgcgacggtcgcgcgagccatc
gacgacgcgcctcgcgtgctggtgatcgacgatgcgacggcgcccgctctcgcgacgctc
aaggctgccggggctcacatctcggacgacgaactcgccgcccgcgcggaggggatcacg
gccgaggacatcgcgacgatcgtctacacctcgggcaccacgggcagacccaagggcgtc
gcgctcccccaccgtgcgttcgtccagtggcccatcaacggcgccgcggacaaggacttc
ggcacgttggccgacggtgacgctcgacttctgctgttcctgccgctcgctcacgtgctc
gcacggcacgtggagttcctggcgctggcctgcggcgcagtgctgggcctctccccgaac
ccgaagacgcttgcggaggatctcggcacgttcaggcccacatggatcatggccgtccct
cgggtgctcgagaccttctacaacgtggtcgacgcacgcgcgggcgggccgctcaggcag
cgcctgttccggtgggcggcagaggtgtcacgcgacatcgaccggacacgccagaccggc
cgtcgaacgttgggcctgcacgcacgcgcgtggctcgcgaagcgcctggtgctgaacaag
gtccagcacgcgctcggcggcaacctcaggtacatcgtctgcggcggcgccaagctgtcg
gagaggatctcgcacttctacggcggccttgcgatccacgtgatggaggggtacggctcg
accgagctggccgggccgatgacctgcaatccgccgtcgcacgtgaaggtgggttcggtg
ggccgcccgtatccgggcggagccatcaggatcgcagacgacggagaggtgctcgcccag
ggatccaacatgttcgtgggctactaccgcaaccccgacgcgacggccgaggcgatcagg
gacgggtggttccacaccggcgatctcgggtcgctcgacgaggacggctacctcaccatc
acgggtcggaagaaggagatcttggtgacggcgagcgggaagaacgtccagccggcctgc
ctggaggacgcgatccgcccgtacccgctggtgcaggaggtggtcgtcgtaggtgacggc
aggccgttcatcggcgcgctactgtcgatcgacgagacgatgctcccgtcctggctcaag
acgaaggggctgccgacgatgtcggtgaccgaggcggcctcgcaccccttcgtgaaggat
cacgtccagggcatcatcgaccaggcgaacgcgctggtgtcccgcgcggaggcgatccgt
gagtggcggttcctgccgcgcgagctgtcggagaagcgtgaggagctgtccgcctcgatg
aaggtgcgtcgccagcaggtcgaggagcacttcgccgacgttatcgcgagcatctacggc
gagatgcgctga

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