Demequina capsici: RN607_06110
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Entry
RN607_06110 CDS
T10255
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dcp Demequina capsici
Pathway
dcp03030
DNA replication
dcp03430
Mismatch repair
dcp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RN607_06110
03430 Mismatch repair
RN607_06110
03440 Homologous recombination
RN607_06110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcp03032
]
RN607_06110
03400 DNA repair and recombination proteins [BR:
dcp03400
]
RN607_06110
Enzymes [BR:
dcp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RN607_06110
DNA replication proteins [BR:
dcp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RN607_06110
DNA repair and recombination proteins [BR:
dcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RN607_06110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
UVR
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
WNM28578
UniProt:
A0AA96FEE4
LinkDB
All DBs
Position
complement(1263684..1265405)
Genome browser
AA seq
573 aa
AA seq
DB search
MTTPDLAPLLAGTQRSLEEIGEPLSATTFVVVDLETTGGSPETSAITEIGAVKTVGGEVV
GEFQTLVDPGGPIPPMIVALTGITDAMVMAAPRIETVLPSFLEFLGDAVLVAHNARFDVG
FLKAACRLHGYPWPGNEVVDTLLLARRATTKEEAPNKKLGTLARVFGTQVTPNHRALDDA
RATSEILHGMLERLARFGITHREDLDSLRNPMPEKLRRKAVLADSVPAKPGVYIFRGPRG
ERLYVGTSKNLRARVKSYFTRGEQRRQIREMLELAVAVDTHVCATEIEANVREVRLIEEH
RPRYNRRSARPERTAWVKLTAEPYPRLSVSRSIAGAGAALGPMRGAGDARGAIEALQIAL
SLRTCTTRLPLVPRPHARACLLKDLGQCSAPCLRGQESHYDDAVSAARDAMRHDPSPVVA
ALSAQIQEHAQRLDYERAAELRDGVSALIEASMRAQRLAALRSVSLVAARAQGEGWDLVS
VAGGLLAGSAHVSHGVWETAGTLRDAWASLDVVEPLIEEQEMLARWLERPGTRLLHIDGD
WAQPLDGAGRHASWVQARRADHANVTDSRRGGS
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccccgatctcgcgccgctcctcgccggcacccagcgcagcctggaggagatc
ggcgagccgttgtcggcgacgacattcgtggtcgtggacctcgagacgaccggaggctcg
ccggagacgtcggcgatcacggagatcggtgcggtcaagacggttgggggcgaggtcgtc
ggcgagttccagaccctggtcgacccgggcgggccgatcccgccgatgatcgtggcgctg
accgggatcaccgacgccatggtgatggccgcgcccaggatcgagacggtgctgccgtcg
ttcctggagttcttgggcgatgcggtgctcgtcgctcacaacgcacgcttcgacgtcggc
ttcctcaaggcggcgtgccggttgcacgggtacccgtggccaggcaacgaggtggtggac
acgctgctgctcgcacgccgcgccaccaccaaggaggaggcgcccaacaagaagctcggc
acgctcgcacgcgtgttcggcacacaggtgacgcccaaccaccgcgcgctcgacgacgcc
cgcgccacctccgagatccttcacggcatgctggagcggttggcgcgcttcggcatcacc
caccgcgaggacctcgacagcctccgcaacccgatgccggagaagctgcgacgcaaggcc
gtcctcgcagactcggtgcccgccaagccgggcgtgtacatcttccgtgggccgcggggc
gagcggctttacgtagggacgtccaagaatctgcgcgcccgcgtcaagagctacttcacg
cgcggcgagcagcggcgccagatccgcgagatgctcgagctcgccgtcgcggtggacacc
cacgtgtgcgccaccgagatcgaggccaacgtgcgcgaggtgcggctcatcgaggagcat
cgaccgcgttacaaccgaaggtccgcacggcccgagcgcaccgcctgggtcaagctcacg
gccgaaccgtatccacgactgtccgtgtcacgctcgatcgccggcgcgggcgcggctctc
ggccccatgcgcggcgccggagacgcacggggcgcgatcgaggcgctgcagatcgcgctg
tcgctgcgcacgtgcaccacacggcttccgctcgtgccgcgcccccacgcgcgcgcgtgc
ctgctcaaggacctcggccagtgctcggcaccgtgcctgcgcgggcaggagtcgcactat
gacgacgccgtgagcgccgcgcgcgacgcgatgcgacacgacccctcccccgtggtcgcc
gcattgtcggcgcagatccaggagcacgcgcagcggctcgactacgaacgcgccgcggag
ctacgggacggcgtgagcgcgctcatcgaggcatccatgcgcgcgcagcgtctcgccgcg
ttgcgcagcgtcagcctcgtcgcggcacgagcgcagggcgagggctgggacctcgtgtcc
gtggcaggcgggctgctcgcgggatccgcacacgtgtcgcacggggtgtgggagaccgca
gggaccctgcgggatgcgtgggcgtcgctcgacgtcgtggagcctctcatcgaggagcag
gagatgctcgcccgctggctcgaacgccccggcacgaggctgctgcatatcgacggcgac
tgggcgcaacccctcgacggggccggccggcacgcctcgtgggtgcaggcgcgccgcgcg
gatcacgcgaacgtgacggacagccgccgcggcggcagctga
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