Demequina capsici: RN607_07610
Help
Entry
RN607_07610 CDS
T10255
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
dcp Demequina capsici
Brite
KEGG Orthology (KO) [BR:
dcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
dcp03051
]
RN607_07610 (pafA)
Enzymes [BR:
dcp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
RN607_07610 (pafA)
Proteasome [BR:
dcp03051
]
Prokaryotic proteasome
Bacterial regulatory particles
RN607_07610 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
CT47
Motif
Other DBs
NCBI-ProteinID:
WNM26067
UniProt:
A0AA96J8D2
LinkDB
All DBs
Position
complement(1585545..1586951)
Genome browser
AA seq
468 aa
AA seq
DB search
MQIAEVPPPLEVEASRRIFGLETEFGLHVVAPGSRPITPEEVAGHLFHSVVQWGRSSNVF
LTNGSRLYIDVGAHPEYATAECDSIEDLIALDKAGERVVQDLVVEGEQRLREAGVDGQIH
LYKNNTDSAGNSYGCHENYLLRRRADFAGFGRQLLPFLVTRQIVTGAGCITRTPEGAHYS
FSPRADHMWEGMSSATTRSRPMINTRDEPHANAELYRRMHVIVGDSTMAQPTTLLKIGST
DLVLRLLEARVDMPDLSLAKEMQAIRDVAHDLTGAAEVELADGRRMTAVEIQQSFLDMVR
SHLGDVIEPTDEVSRILDLWQRGLDAVRTQDFSTVDTELDWAIKLKLLRRYQAKLGCALD
DPRLARLELAFHDVSPERGLTRRMEEQGLIRTIVSEDAIDRAKTTAPATTRAHLRGRFVR
EALASGRDFTVDWVHLKFTGHESRTVLLKDPFRYEDERVDMLLDTVAR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcgccgaggtcccgccgcctctcgaagtggaggcgtcacgccgcatcttcggt
ctcgagaccgagttcggcctccacgtcgtggcccctggttcacgcccgatcactcccgag
gaggtcgcgggtcatctcttccattcggtggtgcagtggggacgctcctcgaacgtgttc
ctgaccaacgggtcccggctgtacatcgacgtcggcgcgcaccccgagtacgcgacggcg
gagtgcgactccatcgaggacctgatcgcgctcgacaaggcgggggagcgcgtggtccag
gacctcgtggtcgaaggcgagcagcggctccgcgaggcaggtgtcgacggtcagatccac
ctgtacaagaacaacaccgactccgcagggaacagctacggctgccacgagaactacctg
ctgcgccgtcgggccgacttcgcgggcttcggacggcagctccttccgttcctggtcacg
cgccagatcgtcaccggcgcggggtgcatcacccgcacccccgagggagcgcactacagc
ttctcccctcgggcggatcacatgtgggagggcatgagctcggcgaccaccaggtcccgg
ccgatgatcaacaccagggacgagcctcacgccaacgccgagctctaccgtcgcatgcac
gtcatcgtgggcgactcgacgatggcgcaaccgaccacgcttctcaagatcggctccacc
gacctggtgctccgtctgctcgaggcacgggtcgacatgccggacctgtcgctcgccaag
gagatgcaggcgatccgtgacgtcgcgcacgacctcacgggggccgccgaggtcgagctc
gccgacggcaggcggatgacggcggtcgagatccagcagtcgttcctcgacatggtgcgc
tcgcacctcggcgatgtcatcgagccgacggacgaggtctcgcggatcctcgacctgtgg
cagcgaggactggacgccgtgcgcacgcaggacttctcgaccgtggacaccgagctggac
tgggcgatcaagctcaagctgctccgtcgctaccaggcgaagctcggctgtgccctcgat
gatccgcggctggcgcggctggagctggcgttccacgacgtctcaccggagcgcggtctc
actcgccggatggaggagcagggcctgatcaggacgatcgtctccgaggacgcgatcgac
cgtgcgaagaccacggctcccgccacgacccgcgcgcatctgcgtggtcggttcgtgcgt
gaggcgctggcgtcgggccgcgacttcaccgtggactgggtccatctgaagttcacgggc
cacgagagccgcaccgtgctcctcaaggacccgttccggtacgaggacgagcgcgtcgac
atgctgctcgacaccgtcgcacgctga
DBGET
integrated database retrieval system
