Demequina capsici: RN607_08350
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Entry
RN607_08350 CDS
T10255
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dcp Demequina capsici
Pathway
dcp03030
DNA replication
dcp03430
Mismatch repair
dcp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RN607_08350 (dnaE)
03430 Mismatch repair
RN607_08350 (dnaE)
03440 Homologous recombination
RN607_08350 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcp03032
]
RN607_08350 (dnaE)
03400 DNA repair and recombination proteins [BR:
dcp03400
]
RN607_08350 (dnaE)
Enzymes [BR:
dcp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RN607_08350 (dnaE)
DNA replication proteins [BR:
dcp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RN607_08350 (dnaE)
DNA repair and recombination proteins [BR:
dcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RN607_08350 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
HHH_3
HROB
Motif
Other DBs
NCBI-ProteinID:
WNM26209
UniProt:
A0AA96F3P2
LinkDB
All DBs
Position
complement(1736596..1740135)
Genome browser
AA seq
1179 aa
AA seq
DB search
MPAREFNHLHVHTEYSMLDGAARIGDLMTEVKSLGQNAVAITDHGYLFGAYEFWNKATAA
GVKPIIGIEAYLTPGTARGDRSRVRWGERGQEGDDVSSGGAYTHATMWAESTAGMHNLFR
LASYASLEGHFFKARMDRDLLQRFSKGIIATTGCPSGEVQTRLRLGQYDEALKAAAEFQD
IFGKENYFVELMDHGLSIETRVYEDLVRISKAIGAPLVATNDLHYTRREDSKAHEALLCI
QSGSNLNEPTYDQGGKRFAFSGDGYYVKSAEEMWDLWGDRHPEALTNTLAIAERCEVAFD
TKADYMPVYDCPPGEDEHSWFVKEVQRGLHERYGESIPSAVQERANFEIEVIAGKGYPGY
FLVVADFIKWAKSQGIRVGPGRGSGAGSMAAYAMRITDLDPLVHQLYFERFLNPERESKP
DFDVDFDERRRAEVIHYVTDKYGEDKVSMIVTYGTIKAKQALKDGARVLGKPYAVGEQLT
KAYPDAIMGKDMPLGAVHDEKHPRYHEGADFRALLESDPEARDVMELAQGLESLKRQWGV
HAAGVIMSSHPLIDIIPIMRREQDGAIITQFDYPTCETLGLVKMDFLGLRNLTILDDALD
NIVDNGKDPLVLEDLPLEDEGTFRLLQSGDTLGVFQLDGLAMRSLLRQMRPDTFEDISAV
LALYRPGPMGMNSHTNYAERKNGRQQIAPIHPELDEPLKEVLGITYGLIVYQEQVQRIAQ
IVAGYTLGAADLLRRAMGKKKKEILDKEFEPFKNGALERGYSLEAINALWETMLPFADYA
FNKAHTAAYGVLSFWTAYLKAHYPTEYMAALLTSVGTDKDKSALYLAECRRMGISVLTPD
VNESRAFFSAVGSDIRFGMAAVRNVGANVVAEIVKAREEKGRFTSFSDFLDKVPAAVCNK
RTIDSLIKAGAFDSLGHTRRSLNAVHEQAIDSVVGVKRQEATGQFDLFGMDEELGGGVSV
VVPPIDEWDKKTLLNLERDMLGLYVSDHPLSGLENVLRSEASHQILTATPAHGVSDGDQV
TFAGLLTRVDRRIAKSGNAYAIVTLEDLSGETEISFFGKTYETYARDLSDDAVLVIKARA
RERGDGGMQYSAVELRVPNLQVQDMSPLVITLPAVRATPPVVEEVRSILTSHPGGIEVKL
VLTGSGDPVTVAVADQYRVSRSSALYGDLKAVLGPGCLA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgccggctcgggagttcaaccatcttcatgtccataccgagtactcgatgctggacggc
gcggcccgcatcggcgacctgatgaccgaggtcaagagcctcgggcagaacgccgtcgcc
atcaccgaccacggctacctcttcggcgcctacgagttctggaacaaggcgaccgcggcc
ggtgtgaagccgatcatcggcatcgaggcgtacctcacgccgggcaccgccaggggagac
cgctcccgggtgcgctggggcgagcggggccaggaaggcgacgacgtctcgtcgggcggc
gcctacacccacgccaccatgtgggccgagagcacggcaggcatgcacaacctcttccgc
ctcgcgtcctacgccagcctcgagggccacttcttcaaggcgcgcatggaccgcgacctg
ctccagcgcttcagcaagggcatcatcgccaccaccggctgcccgtcaggcgaggtgcag
acgaggctccgcctgggtcagtacgacgaggcgctcaaggctgcggccgagttccaggac
atcttcggcaaggagaactacttcgtcgagctcatggaccatgggctgtcgatcgagacg
cgcgtctacgaggacctggtgcgcatctccaaggcgatcggcgcgccgctggtggcgacg
aacgaccttcactacacgcgtcgcgaggactccaaggcgcatgaggcgctgctctgcatc
cagtccggctccaacctcaacgagccgacgtacgaccagggaggcaagcgcttcgcgttc
tccggcgacggctactacgtgaagtccgccgaggagatgtgggacctctggggagaccgt
caccccgaggcgctcacgaacacgctcgccatcgccgagcgctgcgaggtcgcgttcgac
accaaggccgactacatgcccgtctacgactgccctccgggcgaggacgagcactcgtgg
ttcgtcaaggaggtccagcgtggcctccacgagcgctacggcgagtcgatcccctccgca
gtgcaggagcgcgcgaacttcgagatcgaggtcatcgcgggcaagggctaccccggctac
ttcctcgtggtcgcggacttcatcaagtgggccaagtcgcagggcatccgcgtgggtccc
ggacgcggctccggtgcgggctccatggcggcctacgccatgaggatcaccgacctcgac
ccgctggtccaccagctgtacttcgagcgcttcctcaaccccgagcgcgagtccaagccc
gacttcgacgtcgacttcgacgagcgtcggcgcgccgaggtgatccactacgtcaccgac
aagtacggcgaggacaaggtgtcgatgatcgtcacctacggcaccatcaaggccaagcag
gccctgaaggatggcgctcgcgtgctcggcaagccgtatgcggtgggcgagcagctgacc
aaggcgtaccccgacgccatcatgggcaaggacatgccgctcggcgccgtccacgacgag
aagcacccgcgctaccacgaaggcgccgacttccgtgcgctgctcgagtcggaccccgag
gcgcgcgacgtgatggagctcgcacagggcctcgagagcctgaagcgccagtggggcgtg
cacgccgcgggcgtcatcatgtcctcgcacccgctgatcgacatcatcccgatcatgcgc
cgcgagcaggacggcgcgatcatcacccagttcgactacccgacgtgcgagaccctcggc
ctggtcaagatggacttcctcggcctgcgcaacctcacgatcctggacgacgcgctcgac
aacatcgtcgacaacggcaaggacccgctggtcctcgaggatctgccgctcgaggacgag
ggcaccttccggctgctgcagagcggcgacacgctgggcgtgttccagctcgacggcctg
gcgatgcgctcgctgctgcgccagatgcgcccggacaccttcgaggacatctccgccgtc
ctggcgctctaccgtccaggcccgatgggcatgaactcccacaccaactacgccgagcgc
aagaacggccgccagcagatcgccccgatccatccggagctcgacgagccgctcaaggag
gtcctgggcatcacctacggcctcatcgtgtaccaggagcaggtgcagcgcatcgcgcag
atcgtcgccggctacaccctgggcgccgcagacctgctgcgtcgcgcgatgggcaagaag
aagaaggagatcctcgacaaggagttcgagcccttcaagaacggtgcgctcgaacgcggc
tactccctcgaggcgatcaacgcgttgtgggagaccatgctgccgttcgcggactacgcc
ttcaacaaggcccacaccgctgcgtacggcgtcctgtccttctggaccgcgtacctcaag
gcgcactacccgaccgagtacatggcggcgctgctcacgtcggtcggcaccgacaaggac
aagtcggccctctacctggccgaatgtcgtcgcatgggcatcagcgtgctcacccccgac
gtcaacgagtcgcgtgcgttcttctccgcggtgggcagcgacatccgcttcggcatggcc
gccgtgcgcaacgtcggcgcgaacgtcgtcgccgagatcgtcaaggcccgcgaggagaag
ggccggttcacgtccttctccgacttcctcgacaaggtccctgcggcggtgtgcaacaag
cgcaccatcgactcgctgatcaaggccggcgcgttcgactccctaggccacactcggcgc
tccctcaacgccgtgcatgagcaggccatcgactccgtggtgggcgtcaagcgccaggag
gccaccggccagttcgacctcttcggaatggatgaggagctgggcggcggtgtctcggtc
gtggtgccgccgatcgacgagtgggacaagaagacgctgctcaacctcgagcgggacatg
ctcgggctctacgtgtccgaccatccgctgtcggggctggagaacgtcctacgctccgag
gcgtcgcatcagatcctcaccgcgacccccgcgcatggagtctccgacggcgaccaggtg
accttcgcgggcctgctcaccagggtcgaccgccgcatcgccaagtcaggcaacgcctac
gcgatcgtcaccctcgaggacttgtcgggtgagacggagatctcgttcttcggcaagacc
tacgagacatacgccagggacctctcggacgacgcggtgctggtcatcaaggcacgggcc
cgcgagcgcggcgacggaggcatgcagtactcggccgtcgagctcagggtccccaacctg
caggtccaggacatgtcgccgctggtcatcacgttgccggccgtgcgcgccacgccaccc
gtcgtcgaggaggtgaggtccatcctcacctcgcaccccggcggaatcgaggtgaagctg
gtcctcacaggatcgggcgacccggtgacggtggccgtggccgaccagtaccgtgtctcg
cgctcgagcgcgctctacggtgacctgaaggcggtgctgggccccggctgcctcgcctga
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