Demequina capsici: RN607_08550
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Entry
RN607_08550 CDS
T10255
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
dcp Demequina capsici
Pathway
dcp00300
Lysine biosynthesis
dcp00470
D-Amino acid metabolism
dcp01100
Metabolic pathways
dcp01110
Biosynthesis of secondary metabolites
dcp01120
Microbial metabolism in diverse environments
dcp01230
Biosynthesis of amino acids
Module
dcp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dcp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RN607_08550 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RN607_08550 (dapF)
Enzymes [BR:
dcp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RN607_08550 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
DUF6885
Motif
Other DBs
NCBI-ProteinID:
WNM26249
UniProt:
A0AA96JF02
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Position
complement(1784484..1785353)
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AA seq
289 aa
AA seq
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MTSLRFTKGHGTENDFVLLFDERGDIALTPERVRFLCDRRAGIGADGVIRAVRADSLEAG
KGLPSDTWFMDYWNADGTTSEMCGNGVRVFARFLEREAGVELGAGMEIGTRAGVRTVTSL
GEGRYSVGMGRWLLGEDDVVVATPGLVPPRPAQSVDVGNPHHVVALASVEELEALDLGAP
PEVAPAPPHGSNVEFVVTLGHRVADGVERGRVRMRVHERGVGETRSCGTGACAVALAVRS
WAGAGAPDVWDIEVPGGEVTVRVLGDRTVLEGPAVLVADGEVVLPSTVA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgctgcgcttcaccaagggacatggcacggagaacgacttcgtgctgctcttc
gacgagcgcggcgacatcgccctgacgcccgagcgagtgcgcttcctctgcgatcgccgc
gcgggcatcggcgccgacggcgtgatccgtgcggtccgcgcggacagcctcgaggcgggg
aagggcctcccttccgacacctggttcatggattactggaacgcggacggcaccacctcg
gagatgtgtggcaacggtgtgagggtcttcgcgaggttcttggagcgcgaggccggcgtg
gagctcggcgcgggcatggagatcggcacccgcgcgggagtccgcaccgtgacgtccctc
ggcgagggacggtactcggtcggcatgggtcgctggctgctcggtgaggacgacgtcgtg
gtcgcgacgcccgggctggtgccgccgcgtccggcgcagtcggtcgacgtcggcaaccct
caccacgtggtggcgttggcgtcggtcgaggagctcgaggcactcgatctgggcgccccg
cccgaggtggcgcccgcaccgccgcacggctccaacgtcgagttcgtggtgacgctcggc
caccgggtcgccgacggagtcgagcgtggccgtgtcaggatgcgcgtccacgagcgcggc
gtcggagagacgcgttcgtgcgggacgggtgcctgcgcggtggcgctggcggtccggtcg
tgggccggtgctggggcacccgacgtatgggacatcgaggtgcccggcggtgaggtgacg
gtgagagtcctcggcgaccgcacggtgctcgaggggcccgcggtcctggtggccgacggc
gaggtcgtgcttccttcgacggtcgcctga
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