Demequina capsici: RN607_08560
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Entry
RN607_08560 CDS
T10255
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
dcp Demequina capsici
Brite
KEGG Orthology (KO) [BR:
dcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcp03016
]
RN607_08560 (miaB)
Enzymes [BR:
dcp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
RN607_08560 (miaB)
Transfer RNA biogenesis [BR:
dcp03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
RN607_08560 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
WNM26251
UniProt:
A0AA96JBZ4
LinkDB
All DBs
Position
complement(1786369..1787901)
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AA seq
510 aa
AA seq
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MTDTTLAPTYVVRTLGCQMNVHDSEHMAGLLEGAGYVAAPEDAETADVVVINTCAVRENA
ATRLYGNLGQLASKKAAQPSMQIAVGGCLAQKDRGEIVEKAPWVDVVFGTHNIDVLPALL
ERARHNARAQVEIEESLKVFPSTLPSKRDAIASGWVSISVGCNNTCTFCIVPSLRGKERD
RRPGEILAEVEALVSQGAVEVTLLGQNVNSYGVEFGDRGAFAKLLRACGDIAGLERVRFT
SPHPAAFTDDVIEAMAQTPNVMPSLHMPLQSGSDRILRSMRRSYRAERFLGIIDRVRAVM
PDASITTDIIVGFPGETEEDFAETLRVVEQVRFTSAFTFQYSPRPGTPAFALEPLPKAVV
QERFERLLALQERITLEDSQGFTGRTVELLVLDAPGRKDEASARMSGREAGNRLVHFAVP
AGVGPDGLGAPRPGDLVTVQVTQAAPHHLIADSPVQGGIYEVRRTRAGAVWEAVQRGDHS
HGEPDACGTGAAGATGSVLLGMPALRPVAT
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccaccctcgcccccacctatgtcgtgcgcacgctcggctgccagatgaac
gttcatgactccgagcacatggcgggtcttctcgaaggcgcgggctatgtcgccgcgccg
gaggatgccgagactgccgacgtggtggtgatcaacacctgcgccgtccgcgagaacgcg
gctacaaggctctacggcaacctgggacagctggcgtcgaagaaggccgcgcagccgtcc
atgcagatcgcggtcggcggctgcctcgcccagaaggatcgcggtgagatcgtcgagaag
gctccctgggtggacgtcgtgttcggcacgcacaacatcgacgtcctcccggcgcttctc
gagcgcgcgcggcacaatgcgcgggcccaggtggagatcgaggagtcgctgaaggtcttc
ccgtccacgctgcccagcaagcgcgatgcgatcgcgtcaggctgggtgtccatctccgtc
ggctgcaacaacacgtgcacgttctgcatcgtgccatcgctgcgtgggaaggagcgtgac
cggaggcccggagagatcctcgccgaggtggaggctctcgtctcccagggcgcggtcgag
gtcacgctcctcggacagaacgtgaactcctacggagtcgagttcggcgaccggggtgcg
ttcgcgaagctgctgcgcgcctgcggtgacatcgcgggactggaacgcgtgcgcttcacg
tcgccgcatcctgcggccttcaccgatgacgtgatcgaggcgatggcgcagacgccgaac
gtgatgccgagcctccatatgccgctgcagtcgggatcggaccggatccttcgctcgatg
cgccgctcctaccgtgcggagcggttccttgggatcatcgaccgagtgcgtgcggtcatg
cccgacgcctcgatcacgaccgacatcatcgtcggcttccccggggagaccgaggaggac
ttcgcggagacgttgcgcgtggtcgagcaggtgcgcttcacctcggccttcaccttccag
tacagcccccggccgggcacgcccgccttcgccctcgagccgctccccaaggcggtcgtg
caggagcgcttcgagcgactgctggcactgcaggaacggatcacgctcgaggactcgcag
ggcttcacagggcggacggtggagctgctcgtgctcgacgccccgggccgcaaggacgaa
gcctcggcgcgcatgtcggggcgagaggcgggcaatcggctcgtgcacttcgcggtgccc
gcgggcgtcgggcccgatggactcggcgcgccacgtcctggtgacctcgtgacggtgcag
gtgacccaggctgcgccccaccacctcatcgccgattccccggttcaagggggcatctac
gaggtgcgtcgaacgcgtgctggcgcggtgtgggaggcggtccagcggggcgatcacagc
catggcgaaccggacgcgtgcggcaccggtgcggctggcgccacggggtccgtcctgctc
ggcatgcccgcgctacgtcccgtcgccacctga
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