Demequina capsici: RN607_08925
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Entry
RN607_08925 CDS
T10255
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
dcp Demequina capsici
Pathway
dcp02024
Quorum sensing
dcp03060
Protein export
dcp03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
dcp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RN607_08925 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RN607_08925 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RN607_08925 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
dcp02044
]
RN607_08925 (ffh)
Enzymes [BR:
dcp01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
RN607_08925 (ffh)
Secretion system [BR:
dcp02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RN607_08925 (ffh)
Eukaryotic Sec-SRP protein
RN607_08925 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
nSTAND3
AAA_18
AAA_30
Zeta_toxin
cobW
MMR_HSR1
AAA_25
GTP_EFTU
APS_kinase
AAA_33
AAA_16
AAA_31
TsaE
ATP_bind_1
Thymidylate_kin
AAA_24
ParA
NPHP3_N
Helicase_RecD
NACHT
DO-GTPase1
ArsA_ATPase
KTI12
AAA
AAA_17
Motif
Other DBs
NCBI-ProteinID:
WNM26322
UniProt:
A0AA96J6J1
LinkDB
All DBs
Position
complement(1857873..1859468)
Genome browser
AA seq
531 aa
AA seq
DB search
MFANLSDRLTETFKSLRGKGRLSEADIDGTIREIRRALLDADVAVPVVRSFTAAIRERAL
GAEVSGALNPGQQVVKIVHEELITVLGGEQRPLRLAKHGPTVIMLAGLQGAGKTTFAGKL
AAHLKAQGQTPLLVAADLQRPNAVTQLKVVGERAGVPVFAPEAGVTREDERARGNPVKVA
KKGLKEAQDKQHTVVIVDTAGRLGVDAELMRQAADIRKAVEPDEVLFVIDAMIGQDAVAT
AQAFQEGVDFTGVVLSKLDGDARGGAALSVAQVTGRPIMFASVGEKLEDIEVFHPDRMAS
RILDMGDILTLIEQAEQKFDQAEAERMAVKMQRGEDFTFTDFLSQMQQLKNMGSMKKMLG
MLPGMGAMRDQIDNIDERELVRTEAIIQSMTPLERDNPKVLNGSRRARIATGSGMTVADV
NSLVKRFEDAQRMMKAMAKGGGLPGMGAGPGGFAGLPGGKKSKGKQAPQRKVKGKSGNPA
KRAQQEQAARSRSAGEQPAAPAGSAFGLGAAPQQDLDPTQIPSDLSKYLRR
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgccaacctctccgaccgcttgaccgagaccttcaagagcctgcgcggcaagggt
cggctctccgaggcggacatcgacgggacgatccgcgagatccgtcgcgctctgctggac
gccgacgtcgccgtaccggtggtgcggtcgttcaccgcggcgatccgcgagcgcgcgctc
ggcgcggaggtgtcgggcgcgttgaaccccggccagcaggtcgtcaagatcgtccacgag
gagctgatcaccgtgctcggcggcgagcagcggccgttgcgcctcgccaagcacgggccg
acggtcatcatgctcgccggcctgcagggcgcgggaaagaccacgttcgcaggcaagctc
gccgcgcacctcaaggctcaaggccagactccgctgctcgtcgctgcggaccttcagcgg
ccgaacgcggtgacccagctcaaggtcgtgggcgagcgtgcaggcgtaccggtgttcgct
cccgaggcgggcgtgacgcgcgaggacgagcgggctcgcggcaaccccgtgaaggtggcg
aagaagggcctcaaggaggcgcaggacaagcagcacacggtcgtcatcgtcgacaccgca
ggccggttgggcgtcgacgcggagctgatgaggcaggcggcggacatccgcaaggcggtc
gagcccgacgaggtgctcttcgtcatcgacgccatgatcggccaggacgccgtcgccacc
gcgcaggcgttccaggagggcgtcgacttcaccggcgtggtcctgtcgaagctcgacggc
gacgcccgcggcggtgccgcgctgtccgtcgcgcaggtgacgggccgcccgatcatgttc
gcgtccgtcggtgagaagctcgaggacatcgaggtcttccaccctgatcgcatggcgtcg
cgcatcctcgacatgggcgacatcctcacactgatcgagcaggccgagcagaagttcgat
caggccgaggccgagcgcatggccgtgaagatgcagcgcggcgaggacttcacgttcacg
gacttcctgtcgcagatgcagcagctgaagaacatgggctccatgaagaagatgctcggc
atgctgcccggcatgggggccatgcgggatcagatcgacaacatcgacgagcgcgagctc
gtgcgcaccgaggcgatcatccagtccatgacgccgctggagcgcgacaacccgaaggtg
ctcaacggctcgcgacgcgcgcgcatcgccacgggatccggcatgacggtcgcggatgtg
aactccctggtcaagcgcttcgaggacgcgcagcgcatgatgaaggccatggcgaagggc
gggggcctgcctggcatgggcgccggcccgggaggcttcgcgggtcttcccgggggcaag
aagtccaaggggaagcaggcgccgcagcgcaaggtgaagggcaagtccggcaatccggcc
aagcgcgcccagcaggagcaggccgcacggtcgcggtccgcgggcgagcagcccgccgcg
cccgcggggtctgcgttcggccttggcgccgctccccagcaggacctcgaccccacgcag
atcccgtcggacctgagcaagtacctgaggcggtag
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integrated database retrieval system
