Demequina capsici: RN607_08980
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Entry
RN607_08980 CDS
T10255
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dcp Demequina capsici
Pathway
dcp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dcp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RN607_08980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcp02000
]
RN607_08980
Transporters [BR:
dcp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RN607_08980
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WNM26333
UniProt:
A0AA96FAY7
LinkDB
All DBs
Position
complement(1873230..1874846)
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AA seq
538 aa
AA seq
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MTNPFRLSRRHLVAPAAVLAAATALAGCSSSSGTEATVSASSTPAAAQDVVFAIKEDPTC
LDPQQTSMTTSLNIGRQLTDSLLDQDPATGDIVPWLASDWSVNDDATAYTFTLRDGVTFS
DGTPLTSEVVAENFDAIMALGSSASLASAYLAGYTGTDVTSETEFTVNFSAPNVQFAQGA
TTMSLGILSADTVAASAEDRCQSVVGTGPFVLDSYTVNDSVKIVKRDGYDWGSELRGHTG
EAYLDSVTFPIITEASVRTGGLESGEYDLIQDVPYIDESRFSGDAFHLYAAANPGVPNSF
VINTTHGLMGDEAVRQAITKSLDRDQINVLTGSASGQAPTSVLTSSTPGYTDLGDTLAYD
PEGAAALLEADGWTLGSDGIYQKDGQTLTFTVTAFYAQDVLEAAQMQLADNGIDMQINMV
SAGDFFGAIASGDYDALGAGLTRTDPDVLRVLLSVDSASRWGIVDDPELESLLQEQAATV
DTDARQAIVDQIQQLVAEKAYVIPALETVQLHASSANVEGLTFDSAARINLYDAMVVG
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaaccccttccgactcagtcggcggcacctggtggccccagcggccgtgctcgcc
gctgccaccgcgctcgccggatgctccagctcgtcgggaaccgaggccaccgtctcggcc
tcgagcaccccggcggccgcgcaggacgtcgtgttcgccatcaaggaggacccgacctgc
ctcgacccgcagcagacctcgatgacgacctcgctcaacatcggccgccagctcacggac
tcgctgctcgaccaggacccggccaccggggacatcgtcccgtggctcgcctccgactgg
tcggtgaacgacgacgcgacggcgtacacgttcaccctgcgtgacggtgtcaccttctcc
gacggcaccccgctcacgtcggaggtcgtcgccgagaacttcgacgcgatcatggccctc
ggctcgtccgcgtcgctcgcgagcgcctacctcgcgggctacaccggcaccgacgtcacc
tcggagaccgagttcacggtgaacttctccgcgccgaacgtgcagttcgcgcagggcgcc
acgaccatgagcctcggcatcctgtcggccgacacggtcgcggcgtccgccgaggaccgc
tgccagtccgtcgtcggcaccggcccgttcgtgctcgactcctacacggtcaacgactcg
gtcaagatcgtgaagcgcgacggctacgactggggctcggagctgcgcgggcacaccggc
gaggcgtacctcgactcggtgaccttcccgatcatcaccgaggcctcggtccgcacgggc
ggcctcgagtccggcgagtacgacctgatccaggacgtgccctacatcgacgagtcgcgg
ttctccggcgacgccttccacctgtacgcggcggccaaccccggcgtgcccaactcgttc
gtcatcaacaccacgcacgggctcatgggtgacgaggcggtccgccaggccatcaccaag
tcgctcgaccgcgaccagatcaacgtcctcaccggctccgcgagcggccaggcgcccacc
agcgtcctcacctcgtcgacccccggctacacggacctcggcgacaccctggcctacgac
cccgaaggcgccgcggcgctgctcgaggccgacggctggacgctcggctccgacggcatc
taccagaaggacggccagacgctcacgttcaccgtcaccgccttctacgcccaggacgtg
ctcgaggcggcgcagatgcagctcgccgacaacggcatcgacatgcagatcaacatggtc
tccgcgggtgacttcttcggcgccatcgcctcgggcgactacgacgccctcggggcgggc
ctgacccgcaccgaccccgacgtgctgcgcgtcctgctgtcggtcgactctgcctcgcgc
tggggcatcgtcgacgaccctgagttggagtcgctgctgcaggagcaggccgccacggtc
gacaccgacgcccgtcaggccatcgtcgaccagatccagcagctggtcgcggagaaggcg
tacgtcatccccgccctcgagaccgtgcagctgcacgcctcgtccgcgaacgtcgaaggc
ctcaccttcgactccgcggcccgcatcaacctctacgacgccatggtcgtcggctaa
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