Demequina capsici: RN607_11690
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Entry
RN607_11690 CDS
T10255
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dcp Demequina capsici
Pathway
dcp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dcp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RN607_11690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcp03021
]
RN607_11690
03400 DNA repair and recombination proteins [BR:
dcp03400
]
RN607_11690
Enzymes [BR:
dcp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RN607_11690
Transcription machinery [BR:
dcp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RN607_11690
DNA repair and recombination proteins [BR:
dcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RN607_11690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
WNM26854
UniProt:
A0AA96FBT2
LinkDB
All DBs
Position
complement(2458891..2459883)
Genome browser
AA seq
330 aa
AA seq
DB search
MLIAQRPTLTEKVISENRSQFSLKPLEPGFGYTLGNSLRRTLLSSIPGAAITSVRFEGVL
HEFTTIEGVKEDVTEILLNLKTLVVSSEHDEPVVMYLRKSGAGAVTAADIAPPAGVEIHN
PDLHIATLNSKAKFEVELTVERGRGYVPASLNKVYDAEIGQIPVDSIYSPVLKVTYKVDA
TRVAQRTDFDELIIDVETKSSISPRDALASAGSTLVELFSLAKALNEDAEGIEIGPSDTD
EALEEDYNQPIEELNLTQRSYNCLKREGIHTVGELTARSETDLMDIRNFGQKSITEVKEK
LAELGFSLKDSGIEYDGGAAAGVYFSGSED
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcacagcgtcccaccctcaccgagaaggtcatctcggagaaccgttcgcag
ttctcgctcaagccgctggagccgggcttcggctacacgctgggcaactcgctgcgccgc
acgctgctgtcgtccatcccgggcgccgctatcacgtccgtgcgcttcgagggtgtcctc
cacgagttcacgaccatcgagggcgtgaaggaggatgtcaccgagatcctgctgaacctc
aagaccctggtcgtctcctcggagcacgacgagcccgtcgtcatgtacctgcgcaagtcg
ggtgctggtgccgtgaccgccgcggacatcgccccgccggccggtgtcgagatccacaac
ccggacctccacatcgcgacgctgaactccaaggcgaagttcgaggtcgagctgaccgtc
gagcgtggccgtggctacgtgcccgcctcgctcaacaaggtctacgacgcggagatcggc
cagatccccgtggactcgatctactcgccggtgctgaaggtcacgtacaaggtcgacgcc
acccgcgtcgcccagcgcaccgacttcgacgagctcatcatcgacgtcgagaccaagtcg
tccatctccccgcgtgacgcgctcgcctcggccggatcgaccctcgtcgagctgttctcg
ctggcgaaggcgctgaacgaggacgccgagggcatcgagatcggcccgtcggacaccgac
gaggcgctcgaggaggactacaaccagcccatcgaggagctgaacctcacgcagcgttcg
tacaactgcctcaagcgcgagggcatccacaccgtgggtgagctcaccgcgcgcagcgag
accgacctgatggacatccgcaactttggccagaagtcgatcaccgaggtcaaggagaag
ctggccgagctcggcttctccctgaaggactcgggcatcgagtacgacggtggcgcggcc
gccggcgtgtacttctcgggcagcgaagactaa
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