Demequina capsici: RN607_12055
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Entry
RN607_12055 CDS
T10255
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dcp Demequina capsici
Pathway
dcp03020
RNA polymerase
Brite
Enzymes [BR:
dcp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RN607_12055
Transcription machinery [BR:
dcp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RN607_12055
DNA repair and recombination proteins [BR:
dcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RN607_12055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WNM26926
UniProt:
A0AA96JCH4
LinkDB
All DBs
Position
complement(2525783..2529658)
Genome browser
AA seq
1291 aa
AA seq
DB search
MLDVNEFGDLRIGLATAEQIREWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
GCGKYKRVRYRGIVCERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMVTSVDEDGRHEDLPQLRNELEKEKKFIANQRDVDINNRAEKLEKD
IAELEAEGAKADVKRKVKDGAEREMANLRKRADAEIERLDAVFDRFASLKVQDLEGDELL
YRELSRRYGSYFKGSMGAEAIQQRLKDFDLEAEAELLRDIIANGKGQRKTRALKRLKVVN
AFLTTTNSPVGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPKLKLHQCGLPKQMALELFKPFVMKRLVELNHAQNIKSAKRMVERSR
SEVWDVLEEVIREHPVLLNRAPTLHRLGIQAFEPQLVEGKAIHLHPLVCGAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPSDGRPVTMPSQDMIIGLYHLSLLKPGSKGEGR
VFANEAEALMALDAGDITLNSQIQLRVDGDTVPPRGWVAPEGHVDGEPFMLETTLGRSLF
NGLLPVSYPYVNRNVDKKVLGDIVNTLAERYPKVEVAASLDALKSSGFYWATRSGVSIAI
GDVATPPTKQAILERYEAQAEKVQDQFDTGLITDDERRQELIEIWTQATNEVDREMRASF
PEYNTVHTMVGSGARGNWMQVRQIAGMRGLVANPKGEIIPRPIKSNYREGLSVLEYFIAT
HGARKGLADTALRTADSGYLTRRLVDVSQDVIVREDDCGTERGLVMPIAQTLPGGERVKH
DRVETSVFARTLATDVLDKDGNVVATAASDIGDVLIDALIASGVDEVKVRSVLTCESAVG
TCAKCYGRSLATRELVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRV
QELFEARTPKGEAPISEVTGVLRVDDSEATRRLVVTPDNGDEPIEYPVTKRSRLLVQDGE
SVVVGQQLVAGAVDPKNVLRILGPRAAQKHLVDEVQNVYRSQGVEIHDKHIEVIVRQMLR
RVTVLDSGDAPLLPGELVERARFEQANRATVVAGGKPASARPELMGITKASLATDSWLSA
ASFQETTRVLTEAAMSGKSDPLIGLKENVILGKLIPAGTGLQQYRTATVEPTEDAKASLF
PTFGYEEWDGQYFSEGTGEAVRLEEFDIPRD
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacgagttcggcgacctccgcatcggtcttgccaccgcggagcagatc
cgcgagtggtcccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctgaag
ccggagaaggacggactcttctgcgagaagatcttcggccccacccgtgactgggagtgc
ggctgcggcaagtacaagcgtgtccgctaccgcggcatcgtctgcgagcgatgcggcgtg
gaggtcacccgttccaaggtgcgtcgcgagcgcatgggccacatcgagctggccgcgccc
gtcacccacatctggtacttcaagggcgtcccgtcgcgcctcggctacctgctggacctg
gctccgaaggaccttgagaaggtcatctacttcgccgcctacatggtcacgtcggtggac
gaggacggccgccacgaggaccttccccagctccgcaacgagctggagaaggagaagaag
ttcatcgcgaaccagcgcgacgtggacatcaacaaccgcgccgagaagctcgagaaggac
atcgccgagctcgaggccgagggtgccaaggccgacgtgaagcgcaaggtcaaggacggc
gccgagcgcgagatggccaacctgcgcaagcgcgcggacgccgagatcgagcgcctcgac
gccgtgttcgaccgcttcgcgagcctcaaggtccaggacctcgagggcgacgagctgctc
taccgtgagctctcgcgccgctacggctcgtacttcaagggctccatgggcgccgaggcc
atccagcagcgtctgaaggacttcgacctcgaggccgaggccgagctgctgcgcgacatc
atcgccaacggcaagggccagcggaagacccgcgcgctcaagcgcctcaaggtggtcaac
gccttcctcacgaccaccaactcgcctgtcggcatggtgctggacgcggtcccggtcatc
ccgccggacctgcgcccgatggtccagctggacggtggccgcttcgcgacctccgacctc
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctcaagcgcctgctcgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgctgcaggaggccgtggacgcg
ctgttcgacaacggccgtcgtggtcgccccgtcacgggccccggcaaccgtccgctgaag
tcgatctccgacatgctcaagggcaagcagggtcgcttccgtcagaacctgctcggcaag
cgtgtcgactactcgggccgctcggtcatcgtggtcggccccaagctgaagctgcaccag
tgcggtctgcccaagcagatggcgctcgagctgttcaagccgttcgtgatgaagcgcctc
gtggagctcaaccacgcgcagaacatcaagtcggccaagcgcatggtcgagcgttcgcgt
tccgaggtgtgggacgtgctcgaggaggtcatccgcgagcaccccgtgctgctgaaccgt
gcgcccaccctgcaccgtctgggcatccaggcgttcgagccccagctggtcgagggcaag
gccatccacctgcacccgctcgtctgcggcgcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctgcccctgtccgcagaggcgcaggccgaggcccgcatcctgatgctc
tcgagcaacaacatcctgaagccgtcggacggtcgccccgtgaccatgccgtcgcaggac
atgatcatcggcctctatcacctctcgctgctcaagccgggctcgaagggcgagggccgt
gtgttcgccaacgaggcggaggcgctcatggcgctcgacgctggcgacatcaccctcaac
tcgcagatccagctccgcgtcgacggcgacaccgtcccgccgcgcggctgggtggcgccc
gagggccatgtcgatggcgagccgttcatgctcgagacgaccctgggccgctcgctcttc
aacggcctgctcccggtgtcgtacccctacgtcaaccgcaacgtcgacaagaaggtgctg
ggcgacatcgtcaacacccttgccgagcggtacccgaaggtggaggtcgccgcctcgctc
gacgccctcaagtcgtccggcttctactgggcgacccgttcgggcgtgtcgatcgccatc
ggcgacgtcgcgacgcctcccaccaagcaggccatcctggagcgctacgaggctcaggcc
gagaaggtccaggaccagttcgacaccggtctgatcacggacgacgagcgccgtcaggag
ctcatcgagatctggacccaggccaccaacgaggtcgaccgcgagatgcgtgcgtccttc
ccggagtacaacaccgtccacaccatggtcggctccggtgcgcgtggtaactggatgcag
gtccgtcagatcgccggtatgcgtggcctcgtggcgaacccgaagggtgagatcatcccg
cgtccgatcaagtcgaactaccgcgagggcctgtccgtcctcgagtacttcatcgcgacg
cacggtgcccgtaagggtctggccgacaccgctctccgtaccgcagactcgggctacctg
acccgtcgtctggtggacgtctcccaggacgtcatcgtccgcgaggacgactgcggcacc
gagcgtggcctggtcatgcccatcgcccagacgcttcccggcggagagcgggtcaagcac
gaccgcgtggagacctcggtcttcgcccggacgctcgcgaccgacgtgctcgacaaggac
ggcaacgtcgtggcgaccgccgcctcggacatcggcgacgtcctcatcgacgcgctgatc
gcctcgggcgtggacgaggtcaaggtccgttcggtcctgacctgtgagtccgctgtcggc
acctgcgccaagtgctacggccgctcgctcgcgacccgcgagctggtggacatcggtgag
gctgtcggcatcatcgccgcccagtccatcggcgagcccggcacccagctgacgatgcgt
acgttccacaccggtggtgtggcgtccgcggacgacatcacgcagggtctgccgcgtgtc
caggagctcttcgaggcccgtacccccaagggtgaggccccgatctccgaggtcaccggt
gtgctccgcgtggacgactccgaggccacccgccgcctggtcgtcacgcccgacaacggc
gacgagccgatcgagtaccccgtcaccaagcgttcgcgcctgctggtccaggacggcgag
tccgtcgtggtcggtcagcagctcgtcgccggtgccgtggacccgaagaacgtcctgcgc
atcctcggcccgcgtgccgctcagaagcacctggtggacgaggtgcagaacgtgtaccgc
tcgcagggtgtggagatccacgacaagcacatcgaggtcatcgtccgtcagatgctccgt
cgcgtgacggtgctcgactcgggcgacgccccgctgctgccgggtgagctcgtcgagcgc
gcccgcttcgagcaggcgaaccgtgccacggtggtcgctggcggcaagcccgcctcggcc
cgtccggagctcatgggcatcacgaaggcgtcgctcgcgaccgactcgtggctgtctgcg
gcctccttccaggagacgacgcgtgtcctcaccgaggcggcgatgtccggcaagtcggac
ccgctgatcggtctgaaggagaacgtcatcctcggaaagctgatccccgccggcaccggt
ctgcagcagtaccggacggcgacggtggagcccaccgaggacgcgaaggccagcctgttc
ccgaccttcgggtacgaggagtgggacggtcagtacttctcggagggcaccggcgaggcc
gtgcgcctcgaggagttcgacatcccgcgcgactag
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