Demequina capsici: RN607_12265
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Entry
RN607_12265 CDS
T10255
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
dcp Demequina capsici
Pathway
dcp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dcp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RN607_12265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcp02000
]
RN607_12265
Transporters [BR:
dcp02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
RN607_12265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
DUF2793
Big_8
Motif
Other DBs
NCBI-ProteinID:
WNM26965
UniProt:
A0AA96FCM3
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All DBs
Position
complement(2572149..2573333)
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AA seq
394 aa
AA seq
DB search
MSEIPPPEEEKKKGVSRRGLMIGGGVAVAGIAGFSLLSRGGGGGSGSGDCVTTDLSDTEA
KLNVSNWPEYIDEDDGDYVSTLTQFQKDTGISVTYTPDVNDNVEFFSKVRNQLGACQPTG
RDLFVLTDWMAARMIDAGWIQKLDKANVPNLDKNLISSLQGVGWDPNRDYSAPWQSGFSG
IAYNKSLVGEVGSVAELLTRADLKGKVTMLTEMRDTMGLLLLADGADPSNFTDDEWGNAI
DKLSKARTDGQIRAFTGNEYINDLAAGNIAACVAWSGDVAAAEDENLVFLPPEEGMMIWA
DNMLIPVQGQHKKNAEKWIDYYYDPVVAAKLAAYVWYVCPVEGAQAEMENIDPTLVDNPL
IFPTADYLAQTHSFMALDEAKASQYEKDFADVTG
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagatcccgcccccggaggaagagaagaagaagggcgtctcgcgccgcggactc
atgatcggcggtggcgtcgcggtggccggaatcgcaggcttcagcctgctgagccgcggc
ggtggcggcggctcgggctccggcgactgcgtgaccacggacctgtcggacaccgaggcg
aagctgaacgtctcgaactggcctgagtacatcgacgaggacgacggcgactacgtctcg
accctcacccagttccagaaggacaccggcatctcggtgacctacacgcccgacgtgaac
gacaacgtcgagttcttctccaaggtgcgcaaccagctcggcgcctgccagccgacgggc
cgcgacctgttcgtcctcacggactggatggccgcccgcatgatcgacgccggctggatc
cagaagctcgacaaggccaacgtgccgaacctcgacaagaacctcatctcgtcgctccag
ggcgtcgggtgggacccgaaccgcgactactccgctccgtggcagtcgggcttctccggc
atcgcctacaacaagtcgctcgtcggcgaggtgggcagcgtcgcggagctcctcacgcgt
gccgacctcaagggcaaggtcaccatgctgaccgagatgcgcgacacgatggggctgctg
ctgctcgccgacggcgccgacccgtcgaacttcacggacgacgaatggggcaacgcgatc
gacaagctcagcaaggcccgcaccgacggtcagatccgcgcgttcaccggcaacgagtac
atcaacgacctcgccgccggcaacatcgccgcgtgcgtcgcctggtcgggcgacgtggcc
gcggccgaggacgagaacctggtgttcctgccccccgaggagggcatgatgatctgggct
gacaacatgctgatcccggtgcagggccagcacaagaagaacgccgagaagtggatcgac
tactactacgacccggtggtcgccgcgaagctcgccgcctacgtctggtacgtctgcccg
gtggagggcgcgcaggcggagatggagaacatcgaccccacgctcgtcgacaacccgctg
atcttccccacggccgactacctggcccagacgcattccttcatggcgctggacgaggcg
aaggcgtcgcagtacgagaaggacttcgccgatgtcactggctga
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