Daucus carota (carrot): 108192255
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Entry
108192255 CDS
T05350
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 3, chloroplastic
Organism
dcr
Daucus carota (carrot)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
zf-CCHC
CMS1
ERCC3_RAD25_C
YgbB
zf-CCHC_2
Cas3-like_C_2
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
108192255
NCBI-ProteinID:
XP_017228720
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Position
1:complement(9874577..9880124)
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AA seq
781 aa
AA seq
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MTSSSSIINISSSIIHQTSLQEFSRKPTSIFPFSSQKLTHFSSLKASFSRLKQSNRCGCS
SFVASAIATPNSSVLSEEAFRGLGRYEKDDDLNVSESEYESEEYESDVGFVASDVSSDEL
AITKLGLPEKLVQTLAARGITELFPIQRAVLVPALEGKDLIARAKTGTGKTLAFGIPIIK
RLTEDDQERGSQRRSRLPRALVLAPTRELAKQVENEIKESAPYLNTVCVYGGVSYTQQQG
ALSRGVDVVVGTPGRIIDLIERNTLKLGEVEFLVLDEADQMLAVGFEEAVEMILEKIPVK
RQSMLFSATMPSWVKQLSRKYLNSPMTIDLVGNQDEKLAEGIKLYALASTSTSKRAILSD
LVTVYAKGGKTIIFTQTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFNV
LVATDVASRGLDIPNVDLIIHYELPNDAETFVHRSGRTGRAGKEGSAILMYTNNEKRKVR
FIERDVGCKFELISPPAVEEVLESSAKQVIVTLGGVHPASVEFFTPTAQKLIDEQGTGAL
AAAIAQLSGFSRPPSSRSLISYEQGKVTLQLTRDPAYARGFLSAGSVIGFLSSIYTTAAD
EIGKIQMIADERVQGAVFDLPEEVAKELLEKQIPPGNTITKITKLPALQDDGPSNDNYGR
YSNRGGGMRGGSRGGRGYGSSRGRSGGRFSDGDERRGGGWGAGRDGARGGSWGAGRDGAR
GSGGSSWSRTSRSSGSDWLISDRRSSRSPSYGDSDRSFGGACFTCGQSGHRASECPKKLG
F
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgacttcttcttcatcaatcatcaacatctcttcttcaatcattcaccaaacctctctt
caagaattctcaagaaaacccacctcaatctttccgttttcttcccagaaattgactcat
ttctcatctttaaaagcctctttttctcgtttaaaacagtctaatagatgtgggtgttct
tcatttgttgcatctgcaattgctacacccaattcttctgttttgagtgaagaggctttt
aggggtcttggtaggtatgagaaagatgatgacttgaatgtgagtgagagtgagtatgag
agtgaggagtatgaaagtgatgttgggtttgtggcaagtgatgttagtagtgatgaactt
gcgattactaagttgggtttgcctgaaaagcttgttcagactcttgctgctagaggaatt
actgagcttttcccaattcaaagagctgtactagtgcctgcgctggaaggaaaagatctt
attgctcgtgcaaagaccggaactgggaaaacactggcatttggtataccaatcatcaag
cgtcttactgaggatgaccaggaaagagggtctcagaggcggtctaggcttcccagggca
ttggttcttgcaccaacaagggaactggcaaagcaagtagaaaatgaaatcaaggaatct
gcaccatatttgaacacagtttgtgtgtatggaggagtttcatacacccaacagcaaggt
gcactctcacgtggagttgatgttgttgttggaactccaggtagaattattgatctaata
gaacgtaacaccctcaaattgggggaggttgaattcttggtccttgatgaagccgatcaa
atgcttgctgtcggttttgaggaagctgtggagatgattctagaaaagattcctgtgaag
agacagagtatgcttttctccgcaacaatgcctagttgggtgaaacaactttcaagaaaa
tatttaaatagtcctatgaccatagatctggttggtaatcaagatgaaaaattggcagag
gggatcaaactttatgccttagcatccacttcaacttcaaagcgtgctattctgagtgat
cttgtaacggtgtatgcaaagggtgggaaaactattatttttacacaaaccaaacgagat
gctgatgaagtctcattagcattgacaaatagcattgcttcagaggctctgcatggtgat
atatctcaacaccagagggagagaactctaaatggatttaggcagggaaaatttaatgtg
cttgttgccactgatgttgcatctcgcgggcttgatattcccaatgtcgatttaattatc
cactatgaactacccaatgacgcggagacgtttgttcatcgatctggccgcacgggacgt
gcaggaaaagaaggttctgcaattttgatgtacactaataacgagaagagaaaagtcaga
tttattgagcgtgatgttggatgtaagtttgagcttattagtccaccggctgttgaagag
gtgttagagtcatcagctaagcaagttattgtcacccttggtggagttcatcctgcgtcc
gtggagttcttcacgccaactgcacaaaaattgatagatgaacaggggactggtgcactt
gctgctgcaatagcacagttgagtggtttttcgcgtcctccatcatctcgatctctgata
tcgtatgaacagggaaaagtcacacttcagttgacacgtgatcctgcttatgctagaggg
ttcttatctgccggatctgtcattggatttttatcttcaatatacacaacagcagctgat
gagataggaaaaatacaaatgattgcagatgaaagggttcaaggtgctgttttcgatctc
cctgaggaggttgccaaagagttgcttgaaaagcaaataccacctgggaacaccattact
aagattaccaagttgcctgctttgcaagatgatgggccatcaaatgataattatggcaga
tactccaacagagggggtggtatgcgaggaggatctaggggtgggaggggttatggtagc
tcccgtggcaggagtgggggtcgattttctgatggtgacgagaggcgaggtggtggctgg
ggtgccggtcgtgatggtgcacgaggtggtagctggggtgcaggtcgtgatggtgcacga
ggtagtggtggcagtagttggtcaagaacttcaagaagcagcgggagtgattggctgatc
agtgatagaagatcttcacgctcaccatcttatggagatagcgacaggagctttgggggt
gcgtgttttacctgcggacagtctgggcatagggcatcagaatgccccaagaagctaggt
ttttag
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