KEGG   Daucus carota (carrot): 108192276
Entry
108192276         CDS       T05350                                 
Name
(RefSeq) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
dcr  Daucus carota (carrot)
Pathway
dcr00040  Pentose and glucuronate interconversions
dcr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    108192276
Enzymes [BR:dcr01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     108192276
SSDB
Motif
Pfam: Pectate_lyase_4 Pec_lyase_N Beta_helix
Other DBs
NCBI-GeneID: 108192276
NCBI-ProteinID: XP_017227804
UniProt: A0AAF1ATV6
LinkDB
Position
4:6133440..6135491
AA seq 443 aa
MIMGAVRHILYFVYVGFAMSCAASVEMNFTKHDEMVWNLRVAEAKKANVNAYDPHPHHVT
NQLNSHVHKATDKSSNDTRRGLHGQILKGPCIATNPIDQCWRCDPNWDKNRMKLADCALG
FGRHTTGGKGGKVYVVTDASDTDMVNPKPGTLRHAVIQTEPLWIIFKCNMMITLSQELII
TSNKTIDGRGAQVHIAFGAGLMIQFVKNVIIHNLHVHDIKATNGGMIRSSVDHFGLRSKS
DGDGISVFGSSHIWIDHISMFNCVDGLIDVVAASTAVTISNCHFTRHNEVLLFGATDGFT
DDKIMQVTLAFNHFGNGLVQRMPRCRYGFVHVVNNDYTHYLMYAVGGSSSPTILSQGNRY
IAPVDRNAKEVTKRDYAAESEWKNWVWRSQGDLMINGAFFVESGDPKHVFVSGEGMIVPK
PGTMVDKLTQFAGAIGCKSNEPC
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgataatgggagcagttaggcatatattgtattttgtatatgttggctttgcaatgtcg
tgtgctgcttccgtggagatgaatttcacgaaacacgatgagatggtatggaatttacga
gttgcggaagcgaagaaagctaatgtaaatgcttatgatccgcatccacatcatgtcacg
aaccaattaaacagtcatgtccacaaggcaacggataagagtagtaatgacacaagaagg
ggcttgcacggacaaatattgaaaggcccgtgcatagctacaaaccctatagatcaatgc
tggagatgtgatccaaattgggataaaaaccggatgaagctagctgattgcgctctggga
ttcggccgccacacgaccggtggaaaaggtggcaaagtttatgttgtcacagatgcgtcc
gacacagacatggttaatcctaaacctggaaccttacgtcatgcggttattcaaaccgag
cccctttggatcatatttaaatgcaacatgatgatcacactaagtcaagaacttataatt
acaagtaataaaactattgatgggcgtggagctcaagttcacatcgcttttggagctgga
ctaatgatacaatttgtgaaaaatgtaattatacataatcttcatgttcatgacattaag
gcaactaatggtggaatgattagaagttcggtagatcattttggtttacgatccaagagt
gacggtgatggtatctcagtgtttggctcttctcacatctggattgatcacatttctatg
ttcaattgcgtggacggattgattgatgttgttgccgcttccacagcagttaccatctct
aattgccacttcacacgacataatgaggtgcttttgtttggtgctaccgatggattcaca
gatgacaagataatgcaagtgacgctagcattcaatcattttggtaatggattggttcaa
agaatgccaagatgccgatatggattcgtgcatgtagtcaacaatgattacactcactat
ctaatgtacgctgttggtggcagctctagtcccaccattcttagccaggggaatcgctac
attgctccggtggatcgaaatgctaaagaggtgacgaaaagagactatgcagccgaaagt
gaatggaaaaattgggtatggagatcacagggagacttgatgataaatggggcatttttt
gtagaatctggtgatccgaaacatgtgtttgttagtggtgagggaatgatagtccctaag
cccggaacaatggtagataagctcacacaatttgctggtgctattggctgcaaatcgaat
gagccatgttag

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