Daucus carota (carrot): 108192297
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Entry
108192297 CDS
T05350
Name
(RefSeq) synaptonemal complex protein 1
Organism
dcr
Daucus carota (carrot)
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Gene cluster
GFIT
Motif
Pfam:
Crescentin
Motif
Other DBs
NCBI-GeneID:
108192297
NCBI-ProteinID:
XP_017227916
UniProt:
A0A175YBW2
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Position
4:complement(15636465..15645427)
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AA seq
876 aa
AA seq
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MNKLAGLPGLKSLDKFRAYSGAGVAKTFSNCPRPSDSISLGSFANLKLTAEKLVKEQASA
KTDLDLANCKLKKLSEHISVLEAKLQNAFNENAKLKVKQKEDEKLWRGLESKFSSTKALC
DQLSETLQHLAAQVQEAEKDKVYFENKLAASDADLDRLNDQMKSLSLKLEFSNDTIRNRE
KELQELSIQREEREKSFVDEQSRFCSLIEERGVQIKRLEETIVNKGSDLVNLNHNFESLQ
LEFKLKEDDLNNLSCSKEKLEKEKIDLLSCNQRFAYKLDRALGEIKNLENLVNILSVSLT
DLDNQSLTISDNFKQLSTSFNICFKLAQEGRDLRIQSSQNKYDQLHDRFVHATSEKDVLY
LVNQDLRNKVIDFEKEREFTMVQHAEECRLVEERFLALETKAEGLLSRKNDMESLIAELE
EKLNSTAENAQLSEKRMQESLLKISELEFEYKDNCEKLQAEILKKEEDIDILKKEIEKHE
QSLESQEKKVNQFEVISEERDGLIQKYKEKEKELEDENAKIQELLVRAESNLAEAKKQHE
QMLESKQLELSRHLKEISQKNDQAINDIRRKYEVEKLESIKIEKEKASKAIEEMQAQCDQ
KLAECKEVSEQYSKRIQEEQAGLISRIQQEHDEKETNLIYKHSEQLKYANIQAENELREK
TMSMRKEHDAQLRALRDQHKDECRQLQEELDVQRTKEERQRALLQLQWKVMSDHPQEDQE
VESKKNYSIPASKIRNSHSGKSGQRVVVREEEQEEDSPYLRETQTPVSNILKRTKNENTG
SMRSIPKHSKKVTRREYEIETTNGRTITKRRRTKSTVMFEDPEKNRSRSTRTTKANTPRN
VVKGIKGGGLQKPSNIGDLFSEGSLNPYADDPYAFD
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcttgcaggattgccaggattgaagagtctcgacaagtttcgggcgtattcc
ggtgcgggagttgccaagacgttttcgaattgtccgaggccttcggattcgatttcgctt
gggagttttgctaatttgaagctcactgcagagaaattggtgaaggagcaagcttcggct
aaaactgatcttgacttggcgaactgtaagctgaagaaattgtcagagcacatttctgtt
ctggaagctaagttgcagaatgcttttaatgaaaatgcaaagcttaaagtgaagcagaaa
gaggatgaaaagctttggagaggactggagtctaaattttcttctaccaaggctttatgt
gatcagttatctgaaacattgcaacatttagcagcacaggttcaggaagctgagaaagac
aaagtatattttgaaaacaagttggctgcatcagatgctgatcttgatagattaaatgat
caaatgaagtctttgtcattgaagctggaattttcgaatgacactatcagaaaccgtgaa
aaggaactgcaagaattaagcattcagagagaggaaagagagaaaagttttgtagatgag
caaagcagattctgtagcctcattgaggaaagaggtgttcagattaaaaggcttgaagaa
actatagttaataaaggatctgacttggtgaacttgaatcataacttcgaaagtctgcaa
ctcgagttcaaattaaaggaagatgacttgaacaatttgagttgttctaaggagaaattg
gaaaaggagaagattgatcttctatcatgcaaccaaaggtttgcctataaattggacagg
gcactgggggagattaagaaccttgaaaatcttgtcaatatactgtctgtgagcttgact
gatttagataaccagagcctgaccatttcagataacttcaagcagctcagcacttcattc
aatatttgctttaagttggcacaggagggaagggaccttcgcatccagagctctcaaaat
aaatatgatcagcttcatgatcgctttgtacatgctacatcagagaaagatgtattgtat
ttggtcaatcaagacttgagaaataaggtcattgatttcgagaaagagcgagaattcaca
atggtacaacatgcagaagagtgccgcttagtggaagagagatttctagctctagaaacc
aaagctgaaggtcttctttctaggaagaatgacatggagtcgttaattgctgaattggag
gagaaacttaacagcacagccgaaaatgctcaattatctgagaaaagaatgcaagagtca
ttgttgaagatatcagaactagaatttgaatataaagataattgtgaaaaactgcaagca
gagatactgaaaaaagaagaagatatagacatcctcaaaaaggagatagagaagcatgaa
cagagtttagagtcacaggagaaaaaggtaaatcagtttgaggttatatcggaagagaga
gatggacttattcagaagtacaaggaaaaagaaaaagagctagaagatgaaaatgccaag
attcaagagttgctggttagggctgaaagtaaccttgcagaagccaagaagcagcatgaa
cagatgttagaaagtaaacaattagaattatcaaggcacttaaaggagatttctcaaaaa
aatgatcaggcaattaatgacattcggagaaagtatgaggtggagaagctcgagagtatc
aaaattgaaaaagaaaaggcaagtaaagctattgaagaaatgcaagcacaatgtgaccag
aagcttgcagaatgcaaggaggtatcagagcaatactcaaagcgaatacaagaagaacaa
gctggtttgatttctcgaatccaacaggagcatgatgaaaaggaaacgaacctcatatac
aagcacagcgaacagctaaaatatgctaatattcaagctgaaaatgaattaagggagaag
acaatgtcaatgagaaaagaacatgatgcccaattaagagctttgagggatcagcataaa
gacgagtgtaggcaactccaggaagaattagatgtccagagaaccaaagaagagaggcag
agggctttattacagttacagtggaaagtaatgagcgaccaccctcaggaggatcaagaa
gtagaatctaaaaagaattattccattccggcgagcaagataagaaattctcatagtggc
aaaagtggacagcgcgttgttgtcagagaagaagaacaggaggaggattcaccttacttg
agggaaacacaaactccggtttcaaacatactgaagagaacgaagaatgagaatacagga
agcatgaggagtattcccaaacatagtaaaaaggtaactcgacgagaatacgagattgaa
acaacaaatggaaggacaataacaaaaagaagaagaacaaaaagtactgtcatgtttgag
gatccagaaaagaacaggagcaggagcacgaggactacaaaagcaaatactcccagaaat
gttgtcaaaggaatcaagggaggtggactccagaagccttcaaatataggtgatctgttc
tcagaaggatctctgaatccatatgcagatgatccttatgcatttgattaa
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