Daucus carota (carrot): 108192308
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Entry
108192308 CDS
T05350
Name
(RefSeq) E3 ubiquitin-protein ligase ORTHRUS 2
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108192308
03036 Chromosome and associated proteins [BR:
dcr03036
]
108192308
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108192308
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108192308
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
108192308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAD_SRA
SH3_Tf2-1
zf-RING_UBOX
Chromo
zf-C3HC4_3
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-C3HC4_4
PHD
Prok-RING_1
GerD
zf-RING_6
YjhX_toxin
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
108192308
NCBI-ProteinID:
XP_017227924
LinkDB
All DBs
Position
4:15221899..15227779
Genome browser
AA seq
817 aa
AA seq
DB search
MVSSCMHDRIAQFQSMESSVSQLLPCDSNGDCMVCGEMTLEEDTLTCNTCATPWHIPCLG
TALPADASYWDCPDCSSLPNQPISARCQSTPTVDASEHENGNRQKHLFNLHNFEEDDVLP
KNQVIELFEESLKCSFCMQLPQSPTTILCGHNFCLKCFQKWVGQGKRTCAKCRSIIPSKM
VSNPRINSSLAIAIQIAKSSLIEGSAEACNFVHRQNQPGKANRHESGKKSAFQENIFVTV
PPDHFGPILAENDLRRKQGVLVGQSWEDWIECGQWGAHVSHTEGISGQSDHGAQSVAFSG
GKEVDEDHGDWFIYTGSDGRILLKGEENSKCFHQKLETCNEALHVSFEEGYPVRVLRFSQ
KILDQADGRDTAMINAGYKKDADDSSQNAEFEAEYKVLVHVRPENILDEENMKLQKRKIG
PYKVLHKMNSNIYVLDLPDNIGISNIFNSIDLSQESTIESSVYLDTGYLSPSYLHTEIED
IVDTKIISTRKGGFQKYLVKWKNLAWSNCTWICDEEFQNFNCDLYEKYHSCSSSGSLLTK
RLRDRSDVYRRFGKYYRRDGKSNSHCNMNLFDRLRRKKLPSYVPKTGIRYDGIYRIEKCW
LKVCNEGRKVPRYLFVRCDNDPAPWSSNNYGDRPRSLPDLKELKTASEIRERKESPSWGY
NDEKERWMWIKAPPVSKEKENSQNLEDRRKARKWRTHASSMRARLLKEFRCLLCRKVMVL
PLTTPCAHNFCKSCLLGAFAGKPCIRQRNFEGWRTLRAQKNIMKCPSCSNDIFDFLQNPQ
VNTEMMNLVKSLLHHGEVEKDVEVIKETTDHCENTHV
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggtctccagttgtatgcatgatcgaatagcacagttccagtccatggagagttcagtt
tctcaactacttccatgtgacagcaatggggactgcatggtgtgtggggagatgacactg
gaggaggatactctgacatgcaacacatgtgctactccctggcatatcccctgtcttggg
actgctctacctgccgatgcatcttattgggactgtccagactgctcctccctccccaac
caacccatatccgcaagatgtcaaagtacacctactgttgatgcatctgagcacgagaat
ggtaatagacaaaaacacctctttaacctgcacaatttcgaggaagatgatgtattgccc
aaaaatcaagttattgagctttttgaggagagcctcaagtgttcgttctgcatgcagctt
ccgcagagtccaaccacgatactctgtggtcacaatttttgcctcaagtgtttccagaag
tgggttggacaagggaagcgaacttgtgcaaaatgtcgttctataatcccatctaagatg
gtaagtaaccctcgtataaactcatcacttgctattgccattcaaatagcaaagtctagt
ctcattgaggggagtgcagaggcctgcaactttgttcacagacaaaaccagcctggcaaa
gcaaaccgtcatgaatctggaaagaaaagtgcatttcaggaaaacatatttgttactgtt
ccaccagatcattttggaccaattttagcagaaaatgatctgcgcagaaagcaaggtgtc
ttagttgggcaatcttgggaggattggatagaatgcggacagtggggagctcatgtatcg
cacactgaagggatatccggccagtcagatcacggggctcagtctgttgcattctctgga
gggaaagaagttgacgaggatcatggtgactggttcatctatacaggaagtgatgggagg
attctgcttaagggtgaagaaaatagcaaatgctttcatcaaaagttggagacttgtaat
gaagctctacatgttagttttgaagaaggctatcctgttcgagttttaagattttctcaa
aagattctagatcaagctgatggacgcgatactgctatgatcaatgctggatacaaaaag
gatgcagatgacagtagtcagaatgctgaatttgaagctgaatataaagtcttggtgcat
gtacgtcctgaaaatattctggatgaagagaacatgaagcttcaaaaacgaaaaatagga
ccatacaaagtccttcacaagatgaactctaacatctatgttctggatttgccggacaat
atagggattagtaacatcttcaacagcatagatctttctcaagaaagtaccatagaatca
tcagtttatcttgatactggttatctctccccttcttatctacacaccgaaattgaggac
attgttgatacaaaaattatatcaactcgcaagggtggctttcaaaagtatttagtaaaa
tggaaaaacttagcctggtccaattgcacatggatttgtgatgaagagtttcaaaatttt
aattgtgatctttatgagaaataccactcttgcagctcttcagggtcactattgacaaag
cggctgagagacagatcagatgtgtatagaagatttggaaagtattacagacgagacggc
aagtcaaattcccattgtaacatgaacttatttgacaggcttcggagaaagaaacttcct
tcctatgtaccaaaaactggaatacgatatgatggtatatacagaattgaaaaatgttgg
ctgaaagtttgtaatgaagggcgcaaggttcctcgatatcttttcgttcgatgtgataat
gatcctgccccatggagcagtaataactacggggaccgacctaggtcattgcccgatttg
aaagagctgaagacggccagtgaaattagggagagaaaagaaagtccttcctggggttac
aatgatgagaaggaaagatggatgtggataaaagccccaccggtaagtaaagaaaaagaa
aatagccaaaatctagaggatcgaaggaaggcaagaaaatggagaacacatgcatcttca
atgagagcaaggcttttgaaagagttcaggtgtcttctatgccggaaagtgatggttcta
cctcttacaactccctgtgcgcataacttctgcaagtcctgtttgttgggtgcttttgct
ggtaaaccctgtatcagacagagaaactttgaaggttggcggacattacgagcacaaaaa
aatatcatgaaatgtccttcatgttcaaatgacatatttgatttccttcagaatccacag
gttaatacagagatgatgaatttagtgaagtctctcctgcatcatggtgaagtggaaaag
gacgtggaggttatcaaagaaacgacggatcactgtgaaaatactcatgtatga
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