Daucus carota (carrot): 108192406
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Entry
108192406 CDS
T05350
Name
(RefSeq) serrate RNA effector molecule
KO
K27103
serrate RNA effector molecule
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108192406
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
108192406
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
108192406
NCBI-ProteinID:
XP_017227731
UniProt:
A0AAF1BEP0
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Position
9:29969963..29980741
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AA seq
725 aa
AA seq
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MAVDSLDHLDDTKDKPPSAGESPSPPPPPRRRERDSRERRDNIDNNPDRPPRRDYYDRNL
PREREFNKRRASLSPPPPVFHRDRRNYSPPRRSPPMQSYKRPRRDDPGYDGRRGSPPGRG
GYGAGDRRFGYNHPNGHDREIAGRTGYPDERPHGRYAGRPSGGYESGPSGWGPARGGLTD
AVNMSRSQREGLMSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAYFNAHKEEEWL
KDKYHPTNLLAVIDRRNEHARKIAKDFLLELQSGTVDLGPGINASSAGKAGQADATSENE
LDVGGKTKRHAKGSAKENDIPKAHPVSSEPRRVIVDIEQAQALVRKLDLEKGIEDNILCR
TDSERTSREKSHGGSSGPVIIVRGSTSVKGLEGTELLDTLMTYLWRIHGLDYYGLIETSE
AKAFRHVRVDGKNSDITSNGVEWEKKLDSFWQERLNGQDPLEMMTAKEKIDAAAGESIDP
YVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELLLEVTSKVREDLYFQNYM
DDENAPGGTPVMQPTILEKPQKRRPGPDNNMKDDRGRRERDNRNNGGERYDRADNPQSMD
FQSNNDGQDGSNLDESMFDGFNGQGMHFPSDMAPPPVLMPVPGAGPLGPFVPAPPEIAMQ
MLREQGGPSPFESGGRNGRSGSHLGGPAPIIALPPQFRQDPRRLRSYDDLDAPEDEVTVI
DYRSL
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgactctctcgaccacctcgacgacaccaaggacaagcctccctccgccgga
gaatcgccgtcgcctcctccgccgccgcgaagacgcgagagagattctagagagaggaga
gataacattgataataaccccgatcgaccgccgcggagagactattatgatcgcaatttg
cctcgggaacgggaatttaataagaggagagccagtttgtcgccgccgccgccggtcttt
caccgtgaccggaggaattactcgcctccgagaaggtcgccgccgatgcagagttataag
aggccgaggagagatgatcctggctacgatggacgacgtggtagtccgcctgggcgaggt
ggttatggtgctggtgatcgaaggtttggatataatcatccaaatgggcatgaccgtgaa
atagctggcagaactggttatcctgatgaaaggcctcatggtcggtatgctggacgtcca
tctggtggctatgaaagtggtccatctggctggggtccagcccgtggcggtttgacagat
gctgtaaacatgagcagaagtcaaagggaaggattaatgtcttataaacagttcattcag
gagcttgaagatgatatcttgccatctgaagctgagcgtagatatcaagaatacaagtcg
gaatatataacaacacagaagcgtgcttattttaatgctcataaggaggaagagtggttg
aaggacaaatatcaccctacaaatttgcttgctgtcatagacaggaggaacgagcatgca
cggaagatagcaaaagattttttgctggaactgcaaagtggaaccgttgatctaggtcct
ggtatcaatgcctcgtctgcaggcaaagcaggtcaagctgatgccacctctgaaaacgaa
ttggacgtcggtggcaaaacaaaaagacatgcaaagggttctgctaaagaaaatgatatt
cccaaagctcatcctgttagttcagaacctaggcgagtgattgttgatattgaacaagct
caagcacttgtgcggaaacttgatttggaaaaagggattgaggataatattttatgtagg
actgacagtgagaggactagtagggagaagtctcatgggggttcctctggcccagttatt
atagtacggggttcaacttcagttaaagggcttgaggggactgaattactggacacttta
atgacctatctctggcgtattcatggattagattactatggcttgattgaaactagtgaa
gctaaagcttttcgtcatgttagggtggatgggaaaaattctgatataacaagtaatgga
gttgagtgggaaaagaaattagattcattctggcaagagaggttgaatggtcaggatccc
ttggaaatgatgactgcgaaggaaaagattgatgcagctgctggtgaatcaatagatcct
tatgtccgtaaaattagggatgagaagtacgggtggaagtatggctgcggagcaaaggga
tgcacaaagcttttccatgcagctgagtttgtacataagcatctaaagttgaaacaccca
gaacttcttctggaagtaacttcgaaagtgcgggaagatctgtattttcaaaattatatg
gatgatgaaaatgcgcctggtgggacccctgtaatgcagccaactatactggagaaaccc
cagaagcgtcggccaggcccagacaataatatgaaagatgatcggggccgaagagaacgt
gacaatcgtaataatggtggtgaaagatatgatagggctgataatccacaatcaatggat
ttccagtccaacaatgatggtcaagatggtagcaatcttgatgaatcaatgtttgacggc
ttcaatggccaagggatgcatttcccatcagatatggccccccctccagttttgatgcct
gttcctggtgctggtcctttggggccatttgttcctgctccccctgaaattgcaatgcag
atgttgagagaacaaggcgggccttctccttttgaaagtggcggtagaaatgggagatct
ggctctcatttgggtggaccagcacctataatcgctctacctccacaatttcgacaggac
cctcggcgtttaagaagctatgatgaccttgatgcaccagaagatgaagtcactgtgata
gactatcggagtttgtag
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