Daucus carota (carrot): 108192412
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Entry
108192412 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108192412 isoform X1
KO
K23288
syndetin
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108192412
Membrane trafficking [BR:
dcr04131
]
Protein recycling
Others
EARP complex
108192412
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Xre_MbcA_ParS-like_N
Motif
Other DBs
NCBI-GeneID:
108192412
NCBI-ProteinID:
XP_017227754
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Position
6:10596427..10622480
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AA seq
1126 aa
AA seq
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MLPTSPLPFTFNPLLSLTNESTDAFEFEFSKYFPFNSSLFSRGMDLSRFGEKILSSVRSA
RSLNRPEVPARAVAAAAIARALASLPPHQRYNISSSSEELTSIYGSATHGEVVAELEEEF
YQEEFDPVRHVLENIPSEEIEVAYFEEKAALRLAQLDKISEHLSRHVMEHYEQMVNGMHL
VRELEKDLKVANVICMNGRRHLNSSRTEVSRDLIVTTNSKRKQALLDMLPVLTELRYALD
IQVALETHVEQGNFCKAFQVLSEYLQLLDSFSELSAVQEMSRGVEVWLGKTLQKLDSLLL
GVCKDFKEESYITVVDAYAIIGDVSGLAEKVQSFFMQEVLSETHSVLKNIIREDAESPNR
ISTSCRLTYSDLCLQIPELKFRQCLLETLAVLFDLMCSYYAIMSFQPENQLQDSTCRPLI
LKQKQDNDSNSLGDNQHVSLVTDSNTSHKNDRPPSGSAERSPISNVMEEPATDALCDDTL
INGSDYPLSPESEARDGGKEASSSGSPWLLLRNDATVYVSQTLQRGRKNLLQLATSRVAV
LLSSSAVCSTSIHEFLKNYEDLNVFILLGESFSAVEAVEFRHKVKDICENYFAAFHRQNV
YALKMVMERENWMIMPSDTTQAISFAGLVGDGAALIVPSNSSSTGRGSHSSKSANSAEIA
FKKSGFSDWLEKGNPFSMKLATKEPSDSLSQNGLLSPSESEGKNLLLSSKTSPKNRGSTH
INGYIELLEDENEDLLADFIDEDSQLPSRISITKHTRNRSSHSYDTEAIAHTGSSLCLLR
LMDKYARLMQKLEIINIDFFKGICQLFGLYFSFVFESFGQQNTHPSGQGSNHHLTYRLKT
ALSRISQDSDPWIKSQSVSSSLASKNVPSSYMDITPASPPSANFSNVQGTSFGLQERCAG
ADTISVVAQLLHRSKAHLQSMVLQNSAAKVEEFYVHMVDAVPDLIEHIHRTTAKSLLHIS
GYVDRIANAKWEVKELGLEHNGYVDLLLGEFKHYKTRLAHGGLRKEVQDILLEYGLENVA
EILIEGLSRVKRCTDEGRALMSLDLQVLINGLHHFVSVNVKSKLQIVETFIKAYYLPETE
YVHWTRAHPEYNKSHIIGLINLVATMKGWKRKTRLEVLEKIESAIL
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgctccctacctctccactaccattcacattcaatccattactttcactcactaacgaa
tcaaccgacgcttttgaatttgaattctccaagtattttccattcaattcatctctcttc
tctcgcggaatggatctttccagattcggagagaagattttgagctctgttcgctccgct
agatctctcaatcgcccggaggttccggccagagcggttgctgcggcagctattgcgcgt
gctcttgctagtttacctccacaccagaggtataatatttcctccagttccgaagagctc
acctcgatttatggtagtgctactcatggcgaagttgtcgcggagctcgaggaagagttt
tatcaggaagaatttgatcctgtgagacatgtcctggagaacattccatctgaggaaatt
gaggtggcgtactttgaggaaaaggctgcacttaggttggcacaactggataaaatatca
gagcacttgtctcgccatgttatggagcactatgaacagatggtgaatgggatgcattta
gtgagggagttggaaaaagatttgaaggttgcaaatgtcatctgcatgaatggtcgaaga
catttaaactcgtcgaggactgaagtatcgagggatctcattgtcaccacgaattctaaa
agaaaacaagctcttctggatatgcttcccgtgttaactgaattacgttatgcacttgac
atacaagtggcacttgaaactcatgtggagcaaggaaacttttgtaaggcatttcaagta
ctctctgagtatctgcaacttttggacagtttctctgagctttcagcggtacaagagatg
agccgcggagttgaggtttggttgggtaaaactcttcaaaagctggactcacttttgcta
ggggtgtgcaaagatttcaaagaggagagctatataactgtggttgatgcatatgcaata
attggggatgtttctggtcttgctgagaaagtgcaaagcttctttatgcaggaggttctt
tctgagacccactctgttctgaaaaacatcataagagaggatgcagaatctcctaacagg
ataagtacaagttgcagacttacgtacagcgacctatgcctgcaaattcctgaattaaag
tttaggcagtgtttgctggaaactttggctgttctttttgatttgatgtgttcatattat
gctataatgagttttcagccagagaatcagctgcaggattcaacatgccgccctctgatc
ttgaagcagaagcaagacaatgatagcaattctttgggtgataatcagcacgtttcttta
gtaacggattctaacacttcccataaaaatgatagacctccctctggatctgccgaaagg
agtcccatttcaaatgtaatggaggaacctgcaaccgacgcgttgtgtgatgacacctta
atcaatggctctgattatccattatctcctgaatctgaggcaagggatggtggtaaagaa
gcatcaagcagtggctctccatggcttctgttgcgaaatgatgctactgtgtatgtatca
caaactttacagagaggtcgtaaaaatctgttgcaactcgctacaagccgtgtggcagta
cttctttcatcttctgccgtttgttctaccagtatacatgaatttttaaagaattatgaa
gatctaaatgtcttcatcttacttggggaatctttttctgcggttgaagcagttgagttt
aggcataaagtaaaagatatttgtgaaaattattttgcagcatttcatcggcaaaatgta
tatgcactgaaaatggttatggagagggagaattggatgataatgccgtctgacacaact
caagctataagttttgcgggccttgtgggtgatggagcagcattaattgttccatcgaat
agttcttctactgggcgagggagtcactctagtaaatcagcaaattcagctgaaattgca
tttaaaaagagcggtttctccgattggctggaaaaaggaaacccattttctatgaaattg
gctaccaaggaacctagtgattccttgtcacagaatgggttactttccccaagtgaatct
gagggcaagaatttactgcttagttccaaaacatctcccaaaaatagggggagcactcat
attaatggctatatagaacttttggaagatgaaaatgaagatcttcttgctgacttcatt
gatgaagacagccaacttccaagtcggatttctataactaagcacacaagaaatcgatct
tcacattcatatgacacagaggcaatagcgcacacaggatcttcactttgtcttttgagg
ctgatggacaaatatgcaaggctgatgcagaaattagagataatcaacattgacttcttt
aagggaatatgccaattattcgggttgtacttcagttttgtgtttgagagctttggtcag
caaaatactcatcctagcgggcaaggctcaaaccaccatctgacttatcggctgaaaaca
gctttatctaggatttcccaagattctgatccttggataaaatcccagtcagtatcatct
tctttagcatctaagaatgtgccatcgtcttatatggacatcacacctgctagtccaccc
agtgcaaattttagtaatgtgcagggaacttcatttggtctccaggaaaggtgtgcaggt
gctgacactatatctgttgttgctcaattactgcatagatctaaggctcatctccagtcc
atggtcctgcagaacagtgctgcaaaagttgaagagttctatgtgcacatggtagatgct
gtaccagatctcattgaacatattcatcgaacaactgcaaaatcacttcttcacattagt
gggtatgttgatcgaattgctaacgcgaaatgggaagtcaaagagcttggtttagagcac
aacgggtatgttgatttgctgttaggagaatttaaacactataaaaccaggctagctcac
ggaggtcttcggaaagaggtgcaagatatcttattggagtatggacttgaaaatgttgcc
gaaattcttattgaaggcttatctagagtgaaaaggtgtactgatgagggtcgagctctt
atgtcgttggatcttcaggttttgattaatggccttcatcactttgtctccgtaaatgta
aaatccaaactacaaatagttgaaacatttatcaaggcctattatcttccagaaactgaa
tatgtgcattggactcgtgctcatccagagtacaacaaaagtcatatcatcgggctgata
aacctcgttgccacaatgaagggctggaaaaggaaaaccagattggaggtgttagaaaag
atcgagtcggccattttgtag
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