Daucus carota (carrot): 108192503
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Entry
108192503 CDS
T05350
Name
(RefSeq) E3 ubiquitin-protein ligase SIS3
KO
K16284
E3 ubiquitin-protein ligase SIS3 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108192503
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108192503
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108192503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_5
zf-ANAPC11
DUF6515
FANCL_C
Motif
Other DBs
NCBI-GeneID:
108192503
NCBI-ProteinID:
XP_017227861
UniProt:
A0AAF0WVA0
LinkDB
All DBs
Position
4:15302612..15307599
Genome browser
AA seq
372 aa
AA seq
DB search
MAIRGVDFKWYDGFFLSMLATSIIIVAINWKRYHYCEYPLHIWIVVDYTTVFVFRLLMFV
DNGLASGMGLDFGWQQRYARFCGRVVVLSILSLLLYPFLWAWTIIGTLWFTSARSCLPEE
GQKYGFLIWLLFSYCGLICIACMSIGKWITRRQAHLLRGAQQGIPISQFGVLVDMIRVPD
WAFEAAGQEMRGMGQDTAAYHPGLYLTPTQREAVEALIQELPKFRLKAVPTDCSECPICL
EEFHVGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSSIRADSDHSP
AAVVTAAPYVRTQPPSQSYLLRLQGLLRQVGTENGGNADLALEAAENGVLPVLMQPNRSP
EPGRMRSSSLEH
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggctattagaggagttgattttaagtggtatgatggttttttcttgtcaatgcttgca
actagtataatcattgtggcgatcaattggaagcggtaccattattgtgaatatccattg
catatatggattgtggtggactacactactgtgtttgtttttcggctcctcatgtttgtg
gataatggccttgcctcaggaatgggattggatttcggttggcagcaaagatatgctcgg
ttttgtggaagggttgtagttctttcaattctatctctgctactttatcctttcctctgg
gcatggactataattggtactctgtggttcactagcgcaagaagctgtttgcccgaagaa
ggtcagaagtacgggttccttatttggttgctttttagctattgtggtctcatctgcatt
gcatgcatgtccatcgggaagtggattactagaagacaagctcatctattgcgtggtgca
caacaggggatacctatctcacagtttggggtgttggttgacatgatcagggtaccagat
tgggcattcgaagcagctgggcaagagatgagaggcatgggccaagatactgctgcatac
cacccagggctctacttgacgccaactcaaagagaagcagtggaagcgcttattcaggaa
ctgccaaagttcaggcttaaggctgttccaaccgattgcagtgagtgtccaatctgttta
gaagaattccatgttggaaatgaggttagaggtcttccttgtgctcataatttccatgtg
gaatgcattgatgagtggcttcgtttgaatgtaaaatgccccagatgtcgatgttccgtc
tttccaaaccttgatctcagtgcactatccagtattcgtgctgatagtgatcactcaccg
gctgctgttgtgacagcagctccttatgttagaacacaacctcctagccaaagctatttg
ctgagattgcagggcttgcttcggcaagttggtacagagaatggcgggaatgcagatttg
gctttagaagctgctgaaaatggtgttttgcctgtactaatgcagccaaacagaagccct
gagcctgggcgaatgcgttcctcctcacttgaacactaa
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