Daucus carota (carrot): 108192865
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Entry
108192865 CDS
T05350
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108192865
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108192865
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108192865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
VPS18_RING_C
zf-RING_Vps41
zf-ANAPC11
zf_RING_Vps8
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
108192865
NCBI-ProteinID:
XP_017214858
UniProt:
A0AAF1B6T6
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All DBs
Position
6:complement(26464496..26468248)
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AA seq
276 aa
AA seq
DB search
MGKLLVITIIYCFICYFVKPICGIVHLKSLSTSFADTPAKFSARIHGSRICGALLVADPL
DACSSLVNSGVKFDDIKFALIVRGNCSFLDKVRNAQRAGFDGAIVFDDQVEKNLISMIGS
PEGIWIPAVFVSNEAGESLMKHARGEDGECCIISSLKETSWNVLIISIISLLVIGAVLAA
FVSLRLYWRNQNRPSNHVGGKLVELLPCSIFSATHISGYMEKTCAICLQDFREGDSLKVL
PCQHKFHANCVGSWLTKWNTFCPVCKYDLKPEVTHQ
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaattgttggtaatcacaattatttattgttttatatgctattttgtaaaaccc
atctgtggaattgttcatcttaaatcattatcaacttcattcgcggatactccagctaaa
ttcagtgcaagaatacatgggtctagaatatgtggggctttacttgtagctgacccatta
gatgcttgttcttcacttgttaactctggcgttaagtttgatgatattaagtttgctttg
atagttaggggtaattgtagttttctcgacaaggttcgaaatgctcaacgtgctggtttt
gatggggctattgtgttcgatgatcaagttgagaagaatttgatctcaatgattggaagc
cctgaaggtatatggattcctgcggtttttgtttcaaatgaagccggtgagagtctaatg
aagcatgccagaggagaagatggtgaatgctgcataatctcatctttgaaggaaacatca
tggaatgtgctcataatttcaatcatatctctactagttataggagctgtcctggctgca
tttgtctctcttcggctttattggaggaatcagaatcgaccaagtaatcatgttggtgga
aaacttgtggaattacttccatgctcgatatttagtgccactcatataagtggatacatg
gaaaagacttgtgcaatatgcctccaggattttagagaaggggacagtctaaaagtacta
ccttgccaacataaatttcatgctaattgtgtgggctcatggttgactaaatggaacaca
ttctgtccggtatgcaagtatgatttgaagcctgaagttacacaccagtag
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