Daucus carota (carrot): 108192917
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Entry
108192917 CDS
T05350
Name
(RefSeq) sesquiterpene synthase Cop
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
108192917
Enzymes [BR:
dcr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
108192917
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Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
UBA_Rad5
Motif
Other DBs
NCBI-GeneID:
108192917
NCBI-ProteinID:
XP_017214942
UniProt:
A0A164UWV1
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Position
6:4079526..4083281
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AA seq
560 aa
AA seq
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MSLNVLATSSASTIPQLSRRSANYHPSVWGDKFLAYDTPDHKKDDTDTAEQVQKLKEEIR
EMLVQTAAEPKQVINLIDDIQRSGIAYHFEAEIEAVLQRMNDIYDEFCGSNDVDDLHHVA
LCFRLLRQAGHNVSSTVFRKYMDDDRKFKKCLLRDTRGLLSLFEATHFRVHEEEILEEAL
QFTIFHLGNLMSYLSKPLATEISYALKYPIRKNLNRLGVRHYISAEENNDGHNIVLKFAK
LDFNQLQKMHQQELGNITRWWKDLNSAEKLPFARDRVVECYFWILGVYFEPQYSIARRFL
TKVIMLASVVDDIYDLYGTLDELLLFTDAIERWDSNALNLLPDYMKVCYQALLDTYGEME
KVLENESGRPLYRVHEGKNSFTRLAKAYLDEAKWFKECYYPTIEEYMNVALVSSGYGTMA
TNSFVGMGDEATREAFQWVSNDPLIVQASSLIARLCDDMTGHEFEQEKGDIPSAVECYMK
QHGATKDEAYLELDKRVTIAWKDINQECLSPTQIPLSLLARIDNLTRAINILYDGDDGYT
HSSTRTKDLITSVLIDRVPS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcaatgttctggcaacatcttcagcttctaccattccccagctttctcgcagg
tcagccaattatcatcctagtgtgtggggagacaagttcctagcatacgatacccctgat
cacaagaaagatgatacagacacagcggaacaagttcagaagctgaaagaagagatcagg
gagatgttagtgcagacagcggcagagccaaaacaggtgatcaacttgattgatgatatc
caacgatcgggtatcgcgtaccattttgaagctgagattgaggctgtgttgcagcgtatg
aacgacatctatgatgagttttgtgggagtaacgatgttgatgaccttcaccatgttgca
ctgtgtttccggctactaaggcaagccgggcataatgtgtcctctactgtgttccgcaaa
tacatggatgatgacagaaagttcaagaagtgcttgcttagggatactcgaggactgcta
agcttgtttgaagcaacacattttagggttcatgaagaagagatactggaggaagcactt
cagttcaccatctttcatctagggaacctcatgtcttacttgagcaaacctcttgcaacc
gagatctcatatgcacttaagtatcctattcgaaagaatttgaacaggcttggagtcagg
cactacatttctgctgaagaaaacaatgatgggcataatattgttcttaaatttgcaaaa
ttagacttcaaccagttgcagaaaatgcatcaacaagagctaggcaacattaccaggtgg
tggaaagatttaaattctgctgagaaacttccatttgctagggatagagtggtggagtgt
tacttctggatactaggggtgtactttgagccccaatattccatagccagaagatttcta
actaaagtcattatgctcgcatcggttgttgatgatatttatgatttgtatggtaccttg
gatgaacttttactcttcactgatgcaattgaaagatgggactcgaatgcattaaatctg
ctaccggattacatgaaagtgtgctatcaagctctccttgatacttacggtgaaatggag
aaagtgcttgaaaatgaaagtggaagacccttatatcgtgttcacgaagggaagaattca
tttactaggttagccaaggcatatcttgatgaagcgaagtggtttaaagaatgttactat
ccaactatagaggagtatatgaatgtggcactcgtgtcctcgggctatggaacgatggct
acaaattcatttgttggaatgggagacgaggcaacaagagaagccttccaatgggtgtcg
aatgatcctttgattgttcaagcttcgtccttaattgcaagactctgcgatgacatgaca
ggtcacgagtttgagcaggagaaaggagacataccgtcagctgttgagtgctacatgaaa
caacatggtgctacaaaagatgaagcatatttggaattagacaaaagagttacaattgct
tggaaagatattaatcaagagtgtcttagtccaactcagattccactgtcacttcttgcg
agaatcgataatcttacacgagccataaatatactgtatgatggtgatgacggctacaca
cattcatcaacaaggacaaaggatcttataacctcggtgctcattgatcgggttccatca
tga
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