Daucus carota (carrot): 108192922
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Entry
108192922 CDS
T05350
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcr03021
]
108192922
Transcription machinery [BR:
dcr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
108192922
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
Motif
Other DBs
NCBI-GeneID:
108192922
NCBI-ProteinID:
XP_017214950
UniProt:
A0A164WZE0
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Position
6:complement(37816442..37819460)
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AA seq
390 aa
AA seq
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MEAELIELYEAAKKSADLAAGDGVEESSPEEDRCVDALKQLKKFPVNYQLLVSTQVGKQL
RHLTKHPRKRIQTLASNLIGVWKNIIVEETTKSKKNGNLVSKDSVKEEPVHTSGAKKFAR
VNSVKVEKASKTENVKLEKTNSSSSLVSETISKSESISTVKKVEHFDSFKIEKSSSGNSS
KVEKEITKEVTSDVRKPRATVRPIGSTAPPKMSSVTLCKDPLRDKVRELLSEALLKVSGE
VGEELREEADASDPYRVAVSLESAMYEKWGKSNGAQKFKYRSIMFNIKDSQNPDFRRKIL
LGHVKPDQVLLMTPEEMASDERQRQNKEIKDKALFDCERGGARQASTDQFKCGRCKKNEC
TYYQMQTRSADEPMTTYVTCVNCDNRWKFC
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggagctaattgagctgtacgaggcggcgaaaaagtcggccgatttggccgcc
ggcgacggagtggaggagtcgtcgccggaagaagaccgatgcgttgatgcgttgaaacag
ctcaagaagttccctgttaattatcaactccttgtctctactcaggttggtaaacaactt
cgacacttaacgaaacatcctaggaagaggattcagactttggcttccaacttgattggt
gtatggaagaatataattgtcgaggaaacaacaaagagtaagaaaaatgggaacttggtt
agcaaagattccgtaaaagaagagcctgtccatacttctggtgctaagaagtttgcaagg
gtgaactcagtgaaggttgagaaggcctccaaaacagaaaatgtgaagcttgagaaaaca
aactccagcagctctctggtgtctgagacaatttcaaagtctgaaagtatatccactgta
aaaaaggttgaacatttcgatagtttcaagatcgaaaagagttcttctgggaattcctcg
aaagttgaaaaagaaataaccaaagaagtgacttctgatgtgagaaaacctagagcaaca
gtgagaccaataggaagcaccgctcctcccaagatgtcttctgttactctctgtaaggat
ccgttgcgtgataaagttcgagagctgttatcagaggctttacttaaagtttcaggtgag
gttggtgaagaactacgagaagaagcagacgcctctgacccatatagagttgctgtttcc
ttggagtcggctatgtatgagaagtggggcaaatctaacggggcacagaagttcaagtat
agatcaataatgtttaatatcaaggattcccagaaccctgattttcggaggaaaatcctt
cttgggcatgtcaagcctgatcaagttctgcttatgactcctgaagaaatggcaagtgac
gagaggcagcgtcagaacaaagaaataaaagataaagccttgtttgattgtgagcgagga
ggagcacgacaggccagtactgatcaattcaagtgcggccggtgtaagaaaaatgagtgt
acttactatcagatgcagactcggagtgctgatgaacccatgacaacatatgtgacatgt
gtgaactgtgataaccgctggaaattttgttaa
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