KEGG   Daucus carota (carrot): 108192971
Entry
108192971         CDS       T05350                                 
Name
(RefSeq) squalene synthase 2
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
dcr  Daucus carota (carrot)
Pathway
dcr00100  Steroid biosynthesis
dcr00909  Sesquiterpenoid and triterpenoid biosynthesis
dcr01100  Metabolic pathways
dcr01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    108192971
  09109 Metabolism of terpenoids and polyketides
   00909 Sesquiterpenoid and triterpenoid biosynthesis
    108192971
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:dcr01006]
    108192971
Enzymes [BR:dcr01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     108192971
Prenyltransferases [BR:dcr01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   108192971
SSDB
Motif
Pfam: SQS_PSY DUF2172
Other DBs
NCBI-GeneID: 108192971
NCBI-ProteinID: XP_017215009
LinkDB
Position
6:complement(23514283..23524801)
AA seq 415 aa
MGSLGAILKHPDDFYPLLKLKYAAKHAEKQIPPQPHWAFCYSMLHKVSRSFGLVIQQLGP
QLRDAVCIFYLVLRALDTVEDDTSISTEVKVPILIDFHRHVYDNDWHFSCGTKEYKVLMD
EFHHVSNAFLELAKGYQEAIEDITMRMGAGMAKFICKEVESIDDYDEYCHYVAGLVGLGL
SKLFHASGAEDLATDALSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVDKL
EELKDEKNSIVAVRCLNEMVANALIHAEDCLKYMSDLRDPAIFRFCAIPQIMAIGTLSLC
YNNIQVFRGVVKMRRGLTAKVIDRTKTMSDVYGAFFDFSCLLKSKVDNDDPNATITLSRL
EAIQKTCKDSGALTKSRKSYIIESESGYNSVLIAIIIIILAVLYAYLSSNLSKNA
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgggaagcttgggggcgattctgaagcatccagatgatttttatccgctgttgaagctt
aaatatgcggccaagcacgccgagaaacagatcccgcctcagccgcactgggcgttctgt
tactccatgcttcataaggtttccagaagcttcggtctcgttattcaacagctcggccct
cagcttcgtgacgctgtgtgcattttttacttggtacttcgagctcttgacactgtcgag
gatgacacgagcatatccacagaggttaaagtgccaatcctgatagattttcatcgccat
gtatatgataatgattggcatttttcttgtggtacgaaggaatacaaagttctcatggac
gagttccatcatgtttctaatgcgtttctggagctagcaaaaggttaccaggaggcaata
gaagatatcaccatgcgaatgggtgcaggaatggcaaaattcatatgtaaggaggtagaa
tcaatcgatgattatgatgaatattgtcattatgtagccggacttgttggattagggttg
tcaaagctattccatgcttcaggggcagaagatctggctacagatgctttatccaattca
atgggtttatttctccagaagacaaacattattcgagattatttggaggacattaatgaa
ataccaaagtcacgcatgttttggcctcgcgagatctggagtaaatatgttgataaactc
gaggaattaaaagatgagaagaactcaatagtggcggtgcggtgcctaaatgaaatggtc
gcaaatgctctgatacacgcagaagactgtctaaagtacatgtctgatttgcgagatcct
gccatcttccggttctgtgcaattccacagattatggcaattggaacactttctttatgt
tacaacaacattcaagtcttcagaggggtggtgaaaatgagacgtggtctcactgccaaa
gttattgaccgaacaaaaacaatgtccgatgtatatggtgccttctttgatttttcatgt
ttgctgaagtctaaggttgacaatgatgatccaaatgctacaataactttgagtaggcta
gaagcaattcagaaaacatgcaaggattcaggagccttgaccaaaagcagaaaatcttac
attattgagagtgaatcaggatacaactctgtgttgattgcaatcatcatcatcatactt
gctgtcctttatgcatatctatcttcaaacctctcgaaaaacgcatga

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