KEGG   Daucus carota (carrot): 108192980
Entry
108192980         CDS       T05350                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
dcr  Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dcr03016]
    108192980
Enzymes [BR:dcr01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     108192980
Transfer RNA biogenesis [BR:dcr03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    108192980
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf-CCCH zf_CCCH_4 zf-CCCH_PARP12 DEAD_2
Other DBs
NCBI-GeneID: 108192980
NCBI-ProteinID: XP_017215019
UniProt: A0A164V5Q4
LinkDB
Position
6:8710830..8718612
AA seq 700 aa
MSTLAVPDTNGSDHMVEEPENLGDPPAQNVDTDTEQSLATAQELIAKCIAPVKKQYLCPL
PVKSSIKEASNDAVLDAKPSSNSSLVTEKKSKRQAKRERKQEQKSVLHLCPVVAKSGSVS
SCQYADKCRFSHDIEGFKSEKPVDLEGKCPFLEEEGPCPYGMACRFSGTHKAEANAETIS
TRRRESETNGLRKDVQKLLWKNKMKFPMADAQLKLLGLLQKQLNSKKKDLADDEEEDLIV
SDSSHVTDGNGCAEVDMTIRSGSCSEVVEKTVNIDDTSIPDELRPLKKARASINESQLSE
ANNGSSVQDKDPEEDGKPASTDSYISAETDKSLKTHVREKKLIDFSDKLYLAPLTTVGNL
PFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSENFFGVQICGAYPDTVSRAV
ELINQECSVDFIDINMGCPIDLVVNKGAGSALLTKPVRIKNVIQVASCTVDKPITVKVRT
GYFEGRNRIEGLINDISNWGASAVTIHGRSRQQRYSKLPDWEYVYGCARKAPDALQVIGN
GDVYSYVDWNKHKTECPKLNTLMIARGALVKPWIFTEIKEQRHWDITSAERLNILKDYVH
FGLEHWGSDTKGVEATRHFLLEWLSYTYRYIPVGLLDVVPAQLNWRSPSYFGRDELESLM
ASDSAADWIRISEMLLGKVPAGFTFSPKHKSNSHDRAENG
NT seq 2103 nt   +upstreamnt  +downstreamnt
atgtctacgcttgctgtaccagacactaatgggtcggatcatatggtcgaagaacccgaa
aatcttggtgacccaccagcacaaaatgtggatacagatacggaacaatcattagctaca
gcacaagaacttatagctaaatgcatagctcctgtaaagaaacaatatttatgtcctttg
cctgttaaatcttcgattaaagaagccagtaacgacgccgttttggatgccaagccttca
tcaaattcttcacttgtcacagagaaaaaatctaaacgccaggccaaaagggaacgcaaa
caggagcagaagtccgtccttcatttatgtccagtggttgcaaaatctggaagtgttagt
tcgtgtcaatatgctgacaagtgtcgttttagccatgacatagaaggctttaagtcagag
aaaccagtggatttggaagggaagtgtccttttttagaagaggaaggtccatgcccttac
gggatggcttgtagattttctggtactcataaagctgaggccaatgctgaaacaatcagt
actcgaaggagggaatctgagactaacggattgagaaaagatgtccagaagctgttgtgg
aaaaacaaaatgaaatttcccatggctgatgcccaactgaaactactcggccttctgcaa
aaacagcttaattcaaagaagaaagatttggcagatgacgaagaagaggatcttatagtt
tcagattcttcacatgttactgacggaaatggttgtgctgaagtcgacatgactattaga
tctggaagttgttctgaagtggtcgaaaaaactgtcaacatagatgacacttctatacct
gatgagctcagacctttaaagaaagccagggcatcaatcaatgagagtcagttgtctgaa
gcaaataatggttcaagtgtccaggataaggatccagaggaagatgggaagcctgcaagt
acagacagttatatttctgcagagacagataaaagcctaaaaacacacgttagagaaaag
aagcttattgatttcagtgacaagctctatcttgcacctcttacaaccgttggtaatctt
ccttttcgaagggtttgtaaggtgttaggtgctgatgtaacatgcggtgagatggcaatg
tgcaccaacctcttgcagggccaagcatctgaatgggctctgcttagaaggcattcgtca
gagaacttttttggtgttcaaatttgtggcgcatatccagatacagtttcacgagctgtc
gaacttataaatcaggagtgcagtgtggacttcattgatattaatatggggtgcccgatc
gaccttgtagttaataagggtgctgggtcagctcttcttacaaaaccagtgagaataaag
aatgtcatacaggtagcttcatgcactgtggacaagccaattactgtcaaggtacgaaca
gggtactttgaggggagaaaccgcatagagggtttgataaatgatattagcaactgggga
gctagtgctgtaactatacatggccgttcacgtcagcaacgttacagcaagctacccgat
tgggagtacgtatatgggtgtgctagaaaagctccggatgcattacaagtcataggaaat
ggagatgtttattcttatgtggattggaacaagcacaagactgaatgccccaagcttaac
actctcatgattgctcgaggtgcactggttaagccctggatttttactgaaatcaaggaa
caaaggcattgggatattacatctgcagagcgacttaacatattaaaagattatgtgcat
tttggtcttgagcattggggttctgatacaaaaggtgtagaggcaaccagacacttcttg
ttggaatggcttagttacacatatagatatattccagttggtctactagatgttgtccct
gctcaactgaattggaggtcaccttcatacttcggtcgtgatgaacttgagtccttgatg
gcctcagattctgctgcagactggattaggatatctgaaatgttgctgggcaaggttcca
gctggatttacgttttcaccaaaacacaaatcaaattctcatgaccgtgcagaaaatggc
taa

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