Daucus carota (carrot): 108192992
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Entry
108192992 CDS
T05350
Name
(RefSeq) SKP1-like protein 1A
KO
K03094
S-phase kinase-associated protein 1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03083
Polycomb repressive complex
dcr04120
Ubiquitin mediated proteolysis
dcr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108192992
04120 Ubiquitin mediated proteolysis
108192992
09126 Chromosome
03083 Polycomb repressive complex
108192992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108192992
04121 Ubiquitin system [BR:
dcr04121
]
108192992
03036 Chromosome and associated proteins [BR:
dcr03036
]
108192992
Membrane trafficking [BR:
dcr04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
108192992
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
108192992
Cul7 complex
108192992
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
108192992
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
108192992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
Motif
Other DBs
NCBI-GeneID:
108192992
NCBI-ProteinID:
XP_017215035
UniProt:
A0A161ZQF7
LinkDB
All DBs
Position
6:complement(8216772..8218818)
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AA seq
158 aa
AA seq
DB search
MSSSPKMISLMSSDNETFEVPEAVALESQTIKHMVEDDCANTTIPLPNVTGSILAKVIEY
CKHHVEAPKSEDGAVKPDDDLKAFDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTVA
DMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENAWAFE
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctctcccaagatgatctctctgatgagctctgacaacgagacctttgaggtg
cctgaggccgtggctttggagtcacaaaccatcaaacacatggtggaagatgactgtgca
aacaccacaatccctctccctaatgttactggctctattcttgctaaggttattgagtac
tgcaagcatcatgttgaagcccccaaatctgaggatggtgctgttaagcctgatgatgat
ctcaaggcttttgatgctgattttgtcaaggttgatcaggctaccttgttcgatctcatc
ttggcggccaactaccttaatatcaagagtctgttggatttgacatgtcaaactgttgct
gacatgatcaagggaaagacacctgaggagataaggaaaacgttcaacatcaagaatgac
ttcactccggaggaagaggaggaggtcaggagggagaatgcgtgggcattcgagtaa
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