Daucus carota (carrot): 108192998
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Entry
108192998 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108192998 isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03440
Homologous recombination
dcr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108192998
03460 Fanconi anemia pathway
108192998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108192998
Enzymes [BR:
dcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
108192998
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
108192998
FA (Fanconi anemia) pathway
Downstream FA components
108192998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
Motif
Other DBs
NCBI-GeneID:
108192998
NCBI-ProteinID:
XP_017215044
UniProt:
A0AAF0XAV5
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All DBs
Position
6:complement(5917225..5930851)
Genome browser
AA seq
1206 aa
AA seq
DB search
MGENKKSENNVLRLVGIPVEFPYKPYGCQLSYMSRVISTLDRAQRDGHCHALLESPTGTG
KSLSLLCSVLAWQTNCQSKLDSGGGGGGGGGGGGGFFPESDATPSLPNNKNGIKAPRIFY
ATRTHSQITQVVREYRKTSYRVPMAVLASRKHYCTNQQVCGGNNIDEQCKLLLKKQKCPE
YKNMHKVKGHPSLQKGGCNYVHDVEDLLKVGKAVKGCSYFAARSMAHDAQIIFCPYNYVI
NPVIRRAMEVDIEGAIVILDEAHNIEDISRDAGSFNAEEDALLQLQNELAELSLTDEMTY
LPLFETLENIISWIRRRKNSLARQGFQNHCTSWTGEEALRELQEASISQQSFPILEQCAA
GAIQATSDAEEDVAHLSGMSATVLEGLFTSLKYFYSEDGLRIHDYQLVVQNVVKKDSGNS
FGDWTCSFGLWCLNPAVVFKQIADLSLSVILTSGTLSPMSSFSSELGVQFGTCLEAPHVI
DVDSQLWAAVISSGPGNYPLNASYKTSDSYAFQDSLGLSLEEICKIVPAGCLVFFPSYKL
MEKLSSRWQETGQWSRLNAQKSLFVEPRGGNQDDFDDTLKGYYNSICQGGRRDVGRKRKG
KNMGLKNLKEIDITEKSKKGAAFLAVCRGKVSEGIDFSDDNARVVVIVGIPFPNVFDFQV
AQKKKFNDTYKLSKNLLSGNEWYCQQAFRALNQAAGRCIRHRFDYGAIIFIDERFLEGRN
TAYISKWLRKSIRQYDNFDQSLEGLQSFFKDIKERVGKNAEALQNIDVKIDSVGLMGTHE
VSTENKNKLNQTKCCIEEVACSSKLETVKIAPLQPGEVINLDCDTGDDRCIQSPPVAPSP
DDHDVCIVRETPGVYASNVVASPKVLFRDGFDSSTVLQPLTDLPENSSHLNLPNTDKSLV
TPERIMSADAKSVMPETESPLNASINSHIQKRRKSMGWSSLYVHHRSDTPEPRTPVGDSF
TGSTTTAAYENSFIDRYYETNSPGSKCGRSIVDHTSTLQNCSSSSASSDHIANRRLQIFC
SLCKMPLGLPENDLYVMCSITPLSKVHLASLWEKKLQPSAINGSPRIPMLICDVSSIDQQ
LFKITVEGGQGVWCKEDGCVFNTIFCPFCSHPNNCLGVQVMATDPSNVGLLNKILLYLDC
LEIKNFEGSNVNNLSPSGRPGIDRSTGLASIEQFSYSPQMKNSEGWRTTRSKMRLPRNGL
RSTADG
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaaacaagaagagtgagaataatgttcttaggcttgttgggattccggtggag
tttccgtacaagccatatggatgtcagctttcttatatgagcagagtcatctccacgctg
gatcgagcccagcgagacggtcactgccatgctttactcgagtctcccactggaactgga
aaatccctgtctcttctctgctctgttctcgcctggcaaaccaattgtcagtctaagctt
gattccggaggcggaggcggaggcggaggaggaggaggaggaggtttctttcctgaatct
gatgccactccatcgctaccaaataacaagaatggcatcaaagcccctaggattttttat
gccacgagaactcattcacaaattactcaggttgttcgtgaatataggaaaacatcttac
cgagttcccatggcagttctggcatcacggaaacattactgtacaaaccagcaagtatgt
gggggaaataacattgacgagcaatgcaaacttcttctaaagaaacaaaagtgtccagaa
tacaaaaatatgcataaagtaaaaggccatccatctcttcagaaaggaggttgcaattat
gtccatgatgttgaagaccttcttaaagtgggaaaagctgttaaaggttgctcatatttt
gctgcacgttctatggcacatgatgcacaaattatattctgcccatacaattatgtcatt
aatccagttattagaagagcaatggaagttgatattgaaggagcaatcgttattcttgat
gaagcacacaacatagaagacatatctcgtgatgctggtagttttaatgccgaggaagat
gctttacttcaattgcagaatgaactagcagaactcagtctcactgatgaaatgacttac
ctaccattgtttgaaacattagagaacatcataagttggattcgtagaagaaaaaattct
ttagcgaggcaaggctttcagaaccactgcacaagttggactggggaagaggccttgaga
gagcttcaagaagctagcatatcacaacagtcttttccaatattggaacaatgtgctgca
ggggcaatacaagctacttctgatgctgaggaggacgtggctcatttgagtggcatgtca
gcaacagtattggaagggttgtttacctcactaaaatatttttactctgaagatggactt
cgtatacatgattatcagcttgtagtgcagaatgttgtcaagaaagattctgggaactct
tttggggactggacatgttcatttggtttatggtgcttaaatccagctgttgtcttcaag
caaattgctgatctttctctgtcggtgattttaacttcaggtactctgtcacccatgtcc
tccttttcttctgaacttggggttcaatttggtacctgcctggaagctccacatgtcata
gatgttgactcacagttgtgggctgcagtcatttcgagtggaccaggtaactatccgctg
aatgcaagttacaagacatcagactcttatgctttccaggattcacttggcttgtcatta
gaggaaatctgtaaaattgtaccagctggttgtttggtattttttcctagctataaattg
atggaaaaactttcaagtcgctggcaggaaactggtcaatggtctagactaaatgctcag
aaatccctttttgttgagccaagaggaggaaaccaagatgatttcgatgatactttaaaa
ggttattataattcgatttgtcaaggtggtagacgtgatgttgggagaaagagaaagggt
aaaaatatgggcctgaaaaacctcaaagaaatagacatcactgaaaagtcaaaaaaaggt
gctgcttttcttgctgtctgtcgaggaaaggtctcagaaggaattgacttttcagatgac
aatgctcgagttgttgtcattgttggtattcccttcccaaacgtatttgactttcaagtt
gcacaaaagaaaaagttcaacgacacatataaattatccaaaaaccttctaagtgggaat
gagtggtattgtcaacaagcctttcgagctcttaatcaggctgcaggccgttgtatacga
cataggttcgactatggagcgatcatattcattgatgagcgttttcttgaagggagaaat
actgcatatatttcaaaatggttgaggaaatcaataagacagtatgacaactttgaccag
tctctggaaggactgcaatcctttttcaaagatattaaggagcgggttggcaagaatgct
gaggcgttacaaaatattgatgttaagatagatagtgttggtttaatgggtactcatgaa
gtatccacagaaaacaaaaataagttaaaccagactaaatgttgcatagaggaagtggcg
tgcagtagcaagctggaaactgtaaaaattgcaccactgcaacctggagaagtcattaac
ctagactgtgatactggagacgacagatgtattcagtctcctcctgtggcgccgtctccc
gatgatcatgatgtatgtattgtcagggaaacccctggggtgtatgccagtaatgttgtt
gcttctcctaaagttctattcagagatggttttgatagctcaactgtacttcagcctctt
actgatttgcccgaaaattcatcacatttgaacttgcctaacaccgataagtcgttggtc
actcctgaacgaattatgtctgcagatgcaaagagtgtcatgcctgagacagaatcacca
ttaaatgcgagtatcaattctcatattcagaaacggagaaagtcgatgggttggtcatca
ttgtatgtgcaccatcgatctgatactcctgagcccagaactccagtcggtgacagtttt
actggaagcacaacaacagctgcatatgagaactcctttattgatcgttattatgaaaca
aatagcccaggaagtaagtgtggaaggtctattgttgatcacacaagcacactacagaac
tgtagttcttcaagtgcatcttctgatcatattgctaatagaagattgcaaatcttttgt
tcactctgcaaaatgccgttgggccttcctgaaaatgatttatatgttatgtgctcaata
accccgttgtcaaaagtacacttggcatctctgtgggaaaaaaagttgcaaccatcagca
attaatggatcaccacggatacctatgttaatttgcgatgtttcatcaattgatcagcaa
ctttttaaaataactgttgaaggtggacagggagtctggtgcaaagaagatggttgtgta
tttaatactatattctgccctttctgtagtcatccaaataattgtcttggtgtacaggta
atggcaacagatccatcaaatgttgggttgctcaacaagatcctattatatcttgattgt
ttggagattaagaattttgaaggttcaaatgtcaacaatttgtcaccgtctggtaggcca
ggaattgataggagtactggcctggcttcaatcgagcaattctcatactctccacaaatg
aagaactctgaaggctggagaactacaagatcgaagatgagactgccaagaaacggtttg
cgttctactgcagatggttaa
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integrated database retrieval system
