KEGG   Daucus carota (carrot): 108192999
Entry
108192999         CDS       T05350                                 
Name
(RefSeq) protein transport protein SEC31 homolog B
  KO
K14005  protein transport protein SEC31
Organism
dcr  Daucus carota (carrot)
Pathway
dcr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108192999
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dcr04131]
    108192999
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dcr02044]
    108192999
Membrane trafficking [BR:dcr04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    108192999
Secretion system [BR:dcr02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   108192999
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40 Beta-prop_RIG_2nd WDR55 TPR_Sec16 Beta-prop_EIPR1 Beta-prop_EML SRA1 Beta-prop_WDR90_POC16_2nd MIOS_WD40 Beta-prop_HPS5 TPR_GEMI5 Beta-prop_IFT140_1st Sec16 Prp18
Other DBs
NCBI-GeneID: 108192999
NCBI-ProteinID: XP_017215045
UniProt: A0AAF1B349
LinkDB
Position
6:complement(18424135..18439656)
AA seq 1110 aa
MAPIKEVSRSATVAFSPDKPFFAAGTMAGAVDISFSTSANLDIFKLDFQSDDYQLPLVAA
LPSTEPFNRLSWGKSLIGSDDFAFGLIAGGLNDGNIGIWNPATLISSESNEGALLQQLTR
HKGPVRGLEFNSISPNLLASGADEGEICIWDIAKPTEPTHFPPLKGNGSATQGEISFLSW
NSKVQHILSSASFNGTTVVWDLRKQKPVISFSDSVKRRCSVLQWNPDVATQLILASDDDS
SPSLRVWDMRNTMSPLKELVGHTKGVVAMSWCPNDSSYLLTCAKDNRTICWDIASSEIVS
ELPAGTNWNFDVHWYPKIPGIISASSFDGKIGIYNIEGCGRNGVEDGDSRAGPLRAPKWY
KRKAGVSFGFGGKLVSCKSKDASAESSEVFVHNLATENNLADSSSEFEAAMQSGERSSLQ
LLCEKMSLESELMDDKETWGFLKVMFEDEGTARTKLLTHLGFSLPIEAKDAAQNNLSQDA
SALGNEERADKGQMGNKETTSYSFDGEDFFNNLPSPKADTPVSTPGTTFDAQSSVPNGEE
KQQQSDEQEETADALFDDTVQRALVVGDYKGAVAQCFNASRIADALVIAHVGGASLWEST
RDQYLKMSHSPYLKVVSAMVNNDLRSLVKTRPLKAWKETLALLCTFAQGEEWTVLCDALA
SRLVGAGKTLEATLCYICAGNIDKTVGIWSKSVRTKQNGNSYVGLLQGIMEKTMILAMAT
GQKRSASLCMLVEKYAEILASQGLLATATKYLNFMGNEELTTELIILRECIALSTEPERE
VPAPANFGSSQPQNDTYVADRPNYGVDTHQNYYQETAPPQLQQTIQSSQESFNPSYARGY
VPPSPYQNPPQSNIFLPTPGPVPSAQPTFSTPGFNSQPAVRPFVPSTPPALRNVEQYQQS
TLGSQLYPGPNANPGYQAGIQGVGSRGPVPSQFPGSVNMPQVVTPIPGPRGFTPISNTEV
QRSGMGLAQPPSHTQTTPAPAPVAPPAPPPTVQTVDTSNVPAHQRPVITTLTRLFNETSE
ALGGSRANPAKKREIEDNSKKFGSLFEKLNSGDISKNAGEKLVQLCQALDRGDFSTALQI
QVLLTTSDWDECNTWLAALKRMIKTRQNVR
NT seq 3333 nt   +upstreamnt  +downstreamnt
atggctccgatcaaggaggtcagtcgatcggcgacggtggcgttctcgccggacaagccg
ttcttcgccgccggaacaatggccggcgcggtggacatctccttcagcacgtcggcgaat
ctcgacattttcaagctcgatttccagtcggacgattaccaattgccgcttgtcgcggcg
ctgccgagcacggagccgtttaatcggttgtcgtgggggaagagtttgatcgggagcgac
gatttcgcgttcggtttgattgctggcggtttgaatgacgggaatatcgggatatggaat
cctgctactcttattagttctgagtcaaatgaaggtgctcttcttcaacagcttaccaga
cataaaggacctgtacggggtctagaatttaattctatctctccaaaccttctcgcctct
ggggctgatgaaggtgaaatctgtatctgggacattgcaaaacctactgaacctactcat
tttcctcctctcaagggtaacgggtctgctactcagggtgaaatctcatttttatcatgg
aacagcaaggttcaacatattttgtcatctgcttcatttaacgggacaactgtggtttgg
gacctgcggaagcagaagccagtgataagcttttcagattcagttaaaaggaggtgctct
gttctgcagtggaaccctgatgttgccacacagcttattcttgcttcagacgatgacagt
tcaccttcactcagggtttgggatatgcggaatacaatgtcaccactgaaagaactagtg
gggcacactaaaggtgtagttgctatgtcttggtgtcccaatgacagctcttatttgctt
acatgtgccaaagataatcgtactatttgctgggacatagcatcctcggagattgtctct
gaattacctgccggaaccaactggaactttgatgttcattggtatccaaaaatacctggg
atcatatcagcatcttcttttgatggaaaaattggtatctacaatattgagggttgtggc
cgaaatggcgttgaagatggcgatagtcgtgctggtcctttaagagcacccaaatggtat
aaacgtaaagctggagtttcttttggtttcgggggaaagctcgtctcatgtaaatctaaa
gatgcttcggctgaatcttcagaggtttttgtgcataatctagctactgaaaacaatttg
gcggatagttcctctgaatttgaagctgcaatgcaaagtggagagcgatcatcactccaa
ctcttatgtgaaaaaatgtctctcgagtctgaattaatggatgacaaggaaacttggggc
ttcttgaaggtcatgtttgaggatgaaggaacagcaaggacaaaacttcttacgcaccta
ggtttcagtttacctattgaggcaaaagatgctgcgcaaaataatctctcacaggatgca
agcgcccttggcaatgaagaaagagcagataaaggacaaatgggaaataaagaaacaacc
tcatactcttttgacggggaagatttctttaacaatcttccaagtccaaaagctgatacg
cctgtttcaactcctggcaccaccttcgatgcccaaagctccgttccaaacggggaagag
aaacagcagcagtctgatgaacaagaagagaccgctgatgctttatttgatgatactgtt
caacgtgctttggttgttggggactacaaaggggctgttgctcagtgctttaatgccagc
aggatcgcagatgctcttgttatagcccatgttggtggagcttctttgtgggagagtaca
cgtgatcaatacctgaaaatgagtcattctccttaccttaaggttgtctctgctatggtg
aacaatgatcttaggagccttgtaaaaacaaggcctctaaaagcctggaaggaaaccctt
gctcttctttgcacatttgcacagggagaggagtggacagttctatgcgatgcgcttgct
tctaggcttgttggagctggcaaaacactagaagcaactctttgttatatatgtgccgga
aacatagataaaacagtgggtatctggtcaaagagtgttagaactaagcagaatgggaat
tcctatgttggccttcttcagggtataatggagaagacgatgattcttgctatggcaact
ggacaaaaaagaagtgcttctctgtgcatgctagtcgagaagtatgctgaaattttggca
agtcaagggttgttagcaactgcaacaaagtacctaaatttcatggggaatgaggaatta
accacggaacttattatcttacgagaatgtatagccctttctactgaacctgagagagaa
gtgccagcgcctgcaaatttcggtagctcccagcctcaaaatgatacttatgttgctgat
cggcccaattatggtgttgatacccatcagaattattaccaggaaacagcacccccacag
ctgcagcagacaattcaaagtagtcaagagtcgttcaatccttcatatgctagaggatat
gttcctccttccccataccaaaaccctccccaatctaatatatttcttccaacaccggga
ccagttccttcagcacagcctactttttccacgcccgggtttaacagtcagcctgcagtg
agaccttttgttccttccactcctccagcgctaagaaatgtagagcagtatcagcagtcc
acattaggctcacaattatatcctggccccaatgcaaatcctggttatcaggctggtatt
caaggggttgggtctcgtggacctgttccttctcagtttccaggatctgtgaatatgccc
caggttgtgactccaattccaggacctagaggatttacaccaatcagtaatacggaagtt
cagagatctgggatgggtttagcgcagccacccagtcatacgcaaacaacaccagcacca
gctcctgtagctccgccagctcccccacctacagtgcagactgttgatacttcaaatgtc
cctgctcaccagaggccggttataacaactttgactagacttttcaatgagacatcggaa
gcactgggtggttcacgagcaaatccagctaagaagcgggaaattgaagacaattcaaag
aaatttggtagcttgtttgaaaaactcaacagtggagatatatctaaaaatgctggggaa
aagcttgtgcagctctgccaagctctggacaggggtgatttcagtactgctctccaaatc
caggtgcttcttactacgagtgattgggatgaatgtaacacatggttagcagcactcaaa
agaatgatcaaaactaggcagaatgtgagataa

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