Daucus carota (carrot): 108193003
Help
Entry
108193003 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108193003 isoform X2
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcr03009
]
108193003
Enzymes [BR:
dcr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
108193003
Ribosome biogenesis [BR:
dcr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
108193003
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
TRM5-TYW2_MTfase
FtsJ
Methyltransf_15
GCD14
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
108193003
NCBI-ProteinID:
XP_017215048
UniProt:
A0AAF1B2H0
LinkDB
All DBs
Position
6
Genome browser
AA seq
523 aa
AA seq
DB search
MAHLVSIQYGYSSELRISLTCSSKPLTSSNKPNSRLPTRGPSETRRKIPKLNLEVSPHRA
VSAVRLMRIEFGGAFADLLNEKGKGSGENEMGYVERTLGFRTRDLDDKDLRLVTDIVGGT
IRWRRYLDYLISSLCHDAKTFSGMEPLLLQILRIGFYEILKLEMPPHAVVHENVGLAKVA
LRPGAGNMVNGILRKLLLLKESNSLPSPKLEGNDRTQARALAILYSHPVWMVRRWTKHFG
QDSAIELMTWNNKHPSFSLRANSAKGFTRADLEFQLKTLKVPHELSPNLSHFVRIKTGLQ
AVIQAGLLKEGLCSVQDESAGLVVTVLDPHPGEIILDCCAAPGGKTLFIASLMSGQGMLS
ALDINEGRLRILAETAKLQQVDNVITTIHADLCVYAVDTDMRFDKVLLDAPCSGLGVLSK
RADLRWNRRLEDMEELKSLQDRLLDAASILVKPGGLLVYSTCSIDPDENEERVNSFLHRH
PEFCIDSVNKYVPAEFVTEKGFYSSSPVKHSLDGAFAARLLRA
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcccacctggtatccatccaatatggttactcgtcggagttgagaatctctctcact
tgttcttccaaaccactcacctcctcaaacaaacccaattccagacttccaactcgcgga
ccatcggagacgaggcgcaaaattcctaaactcaatttggaggtttcgccacacagagct
gtttctgctgtgagactgatgcgaatagaatttggtggtgctttcgctgatctattgaac
gaaaaagggaaaggttctggtgaaaatgagatgggatatgttgaaagaactctcggtttt
cgaacgcgtgatttggatgacaaagacctgagactggtaacggatattgttggaggtacc
attcgttggcgaagatatcttgattatctcatttcgtcactgtgtcatgatgcaaagact
tttagtggcatggaaccccttctattacagattcttcgtattggtttctatgaaatcttg
aagctagagatgcctcctcatgctgttgttcacgagaatgtagggctcgcaaaggttgcc
ctaaggcctggtgctggtaatatggtcaacggaattctcagaaagctattgttgctcaag
gaaagcaactccttgccttcacccaaattggaaggcaatgatcgtacgcaagcacgtgct
cttgccatcctttattctcatccagtttggatggtgagacgatggacaaagcattttggg
caagatagcgctatagaactgatgacatggaataacaaacatcctagctttagcttaagg
gcaaatagtgcaaaaggttttacaagagctgaccttgagttccaacttaagacgctgaag
gttccccatgagctttctccaaacctcagtcattttgtgcgtatcaaaactggccttcag
gcagtcatacaagctggtctactgaaagaaggtttatgttctgttcaggatgaaagtgca
ggcttggtggttactgttctcgacccacatcctggtgagattattcttgactgttgtgct
gctcccggaggaaagacgctcttcattgcatcccttatgagtggtcaaggtatgttatct
gcacttgacataaacgaaggccgattgaggatacttgcagagacagccaagttgcagcaa
gttgacaatgtcataaccaccatccatgcggatctttgtgtatatgctgtggatactgat
atgagatttgataaagttttgcttgatgctccttgttcaggattaggtgttctctccaag
agggcagacttgcgctggaataggagattggaagatatggaagaactcaaatctttacaa
gatcgacttcttgatgcagcttctatattggtaaagcctggtggtttactagtatatagt
acttgttccattgatcctgatgagaatgaagagagggtgaattcatttcttcacaggcat
ccagaattctgcattgattctgtgaacaaatatgttccggctgaatttgttactgagaaa
ggtttctattcctctagccctgtaaagcattccctggacggagcttttgcagctcgtctt
cttcgggcttga
DBGET
integrated database retrieval system
