Daucus carota (carrot): 108193046
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Entry
108193046 CDS
T05350
Name
(RefSeq) polyubiquitin
KO
K08770
ubiquitin C
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108193046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108193046
Ubiquitin system [BR:
dcr04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
108193046
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SSDB
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GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
TBK1_ULD
Dsc3_N
DUF2604
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
108193046
NCBI-ProteinID:
XP_017215100
UniProt:
A0AAF0XER7
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Position
6:38184486..38187003
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AA seq
381 aa
AA seq
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MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagactcttaccgggaagaccatcactcttgaggtagaaagctca
gacaccattgacaatgtcaaggctaagattcaagacaaggaaggtatccctccagatcag
cagaggcttatctttgctggtaaacagcttgaggatggtcgcaccttagctgattacaat
attcagaaggaatccacccttcatttggttcttcgtctacgtggtggcatgcagatattt
gttaagacacttactggcaagacaatcaccctagaagttgaaagctctgacactattgat
aatgtcaaagctaagatccaggacaaggagggcatccccccagaccagcagagactcatt
tttgctggcaagcagctggaagacggtcgcacccttgctgactacaatatccagaaggaa
tcaacccttcatttggtgctccgtctacgtggtggaatgcaaatctttgtcaagaccctt
actggaaagacaatcaccttggaagtagagagctccgatacgatcgacaatgttaaggca
aagatccaagacaaggagggaattcctccagatcagcagaggttgatatttgctgggaag
cagttggaggacggaaggaccttggcagattacaacattcagaaggaatccactcttcat
ttggtattgaggctgaggggtggaatgcagatttttgtgaagactttgacaggaaagacc
atcacgctagaggtggagagctccgacactattgataatgtcaaagcaaagattcaagac
aaagagggcatcccaccagaccagcagaggcttatatttgctggaaaacaacttgaagat
ggccgcacacttgcagactacaatattcaaaaagagtctaccctccatcttgtgctccgt
ctccgtggggggatgcaaatctttgtgaagacattgaccggcaagaccatcaccttggag
gttgagagctcagatacaattgataacgtgaaggcgaaaatccaggacaaagagggaatc
ccaccagatcaacagcgtttgatttttgctggaaagcagttggaggatggaagaaccctg
gctgactacaacatccagaaggagtccacccttcacctcgttcttcgtcttcgtggtggt
ttttga
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