KEGG   Daucus carota (carrot): 108193145
Entry
108193145         CDS       T05350                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108193145
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dcr01009]
    108193145
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dcr03019]
    108193145
   03036 Chromosome and associated proteins [BR:dcr03036]
    108193145
Protein phosphatases and associated proteins [BR:dcr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     108193145
Messenger RNA biogenesis [BR:dcr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     108193145
Chromosome and associated proteins [BR:dcr03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     108193145
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WDR55 WD40_WDHD1_1st Beta-prop_EML_2
Other DBs
NCBI-GeneID: 108193145
NCBI-ProteinID: XP_017215159
UniProt: A0AAF0XLY4
LinkDB
Position
7:39249114..39257683
AA seq 501 aa
MAALRWNFSQVFGERNPADDVQPMDVISAIDFDDSGDHLAVGDQGGRLIIFEKKPGKDVT
NGYYSRKELEQSDLSGTQHPQYQYKTEIQSHEPEFDYLKSVEIEEKIIDLKWCARPNQSL
FLLSTNHKTIKLWKVKERKLRKVKVMDPDPLVSSENALLAGKSYIGAQNKSSVSNGDLLE
SGEEVENIRTRPHGGHNRVANLEDDAPARCRRVYAHAHDYNINSISNNSDGETFVSADDL
RINLWNLEVSNQCFNIVDTKPSNMDDLTEVITSAEFHPLHCNTLAYSNSRGFIRLVDLRQ
SALCDHSAKILHDGVSKGQKTFFTEIIMSISDMKFTMDGRHILSRDFMTLKLWDTRMETS
PVASYKVHEHLRPKLSDLYNNDAIFDKFDCCISGDGRHFATGSYSNLMKIYSCGLGGEEG
TILEASKNPYSKAYHQAAPRARRSSLGSLTRALYRHGQETSDSKSNEFPGNLNSKLLRMA
WHPKTNMIACATGNSVYMYYA
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggcagctcttcgctggaatttttctcaggtttttggtgaacgtaatcctgccgacgat
gttcagcctatggatgtcatatcagcaattgattttgatgacagtggtgatcatctggcc
gttggtgatcaaggagggcgtcttataatctttgaaaagaaacctggtaaagatgtgaca
aatggctattattctcggaaagaattggaacaatcagatcttagtggcacacaacatcct
caatatcaatacaaaacagaaattcagagtcatgaaccagagtttgattatctgaagagt
gtggaaatagaagagaagattattgacctaaaatggtgtgcaaggcccaatcaatcactt
tttcttctttcaacaaatcacaagacaattaaactttggaaggttaaagaacgcaagttg
aggaaagtaaaagtaatggaccctgatcccttagtctcttcagagaatgctcttttggct
ggaaagagctacattggtgcacaaaataaatcatctgtttctaatggcgatctcttagaa
tcaggagaggaagtggagaatattaggacgcggccacatggtggacataacagagtagct
aaccttgaagatgatgctcctgcaaggtgtcggagggtgtatgcacatgctcatgattat
aatattaactctatctcaaataacagtgatggcgagacatttgtttcagcggatgatctt
aggataaatttgtggaaccttgaggtcagtaatcagtgtttcaacattgttgacacgaag
ccctcaaacatggatgatcttacagaggtgataacatcagctgagtttcatccacttcac
tgtaatacgcttgcttacagcaactcaaggggtttcattcgacttgttgacttgcggcag
tcggcactatgtgaccacagtgctaagatattgcatgatggtgtatctaaaggccaaaaa
acattcttcactgaaataatcatgtcaatatctgacatgaaatttacaatggacggaagg
catatattaagtcgtgacttcatgacattaaagctgtgggatacacgcatggagacttca
ccagttgcaagttacaaggttcatgaacaccttcgacctaagttgtccgacttgtataat
aatgatgctatctttgataagtttgattgctgcataagtggagatggacggcacttcgct
actggatcttatagcaacctaatgaagatatattcttgtggacttggtggtgaggaagga
accatcttggaagctagcaaaaatccatatagtaaggcgtatcatcaagctgctccaagg
gccaggagatcatctcttggcagcttaacacgggcgctttacagacatggacaagagacg
tccgactccaaaagtaatgaatttcccggaaacctgaactccaagttgctgcgcatggct
tggcatccgaaaacaaatatgattgcttgtgctaccggaaacagtgtttatatgtattat
gcttag

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