Daucus carota (carrot): 108193183
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Entry
108193183 CDS
T05350
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00040
Pentose and glucuronate interconversions
dcr01100
Metabolic pathways
Module
dcr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108193183
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
108193183
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Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
108193183
NCBI-ProteinID:
XP_063938163
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Position
7:complement(33496517..33499069)
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AA seq
367 aa
AA seq
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MKAWKACCEDETHNSALVIPQNRTFLLKPLQFSGPCKSSNIHFKLAGKIVAPNKKQDWIG
SHINAWLTFSYVNGLVITGDGQIDGQGSAWWSHPCLNHLHPSNLPGIRFSSYQNYQITRQ
ALVFYRCNGLLLSGITHRNSPRVHIILSNCYDAVISNLRITAPATSPNTDGINVSGSRNV
TVKDTYIGTGDDCIAVSGGSSFVNISGISCGPGHGISIGALGKGGRDQAEEIHVKNCTLR
GTMTGVRIKSWQGGTGYARKISFEKIKLIDVNNPVIIDQFYCPRQINCQNSTSAVELSDI
RYTSISGTSGTDQVINLSCSRSHGCTNISIERVYIKSTTPGKRVYAKCINAHGTWSHTVP
DVKCLLP
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcatggaaggcctgttgcgaggatgaaacacataattctgctcttgtaattcca
caaaatcggacattcctgttaaagccgctccaatttagcggcccctgcaagtcttccaac
atccatttcaagttggcaggcaaaatagtagcaccaaacaagaaacaagactggattgga
tcccacataaacgcatggctcaccttttcctacgtcaatgggcttgtcatcactggagat
ggtcagattgacggtcaaggttctgcttggtggtctcacccttgtcttaatcatctgcac
cctagcaatcttccaggtattagattctcaagttaccagaattaccaaattacacgacag
gcactggtattctatagatgcaacggtcttctactgagtggtataacgcataggaacagc
ccacgagttcatataatactatcaaattgctatgatgccgttatatctaaccttcggata
acagcccctgcaacaagccccaacaccgatggtatcaatgtctctggctcaaggaatgtg
accgtcaaggacacttacatcgggactggtgatgactgcattgctgtgagcggaggatca
tccttcgtcaatatctcaggaatatcctgcggaccaggtcatggaatcagcattggggcc
ttggggaaaggaggaagagatcaggcggaagaaatccatgtgaagaattgtactttaaga
ggaaccatgactggagtaagaatcaagtcctggcagggggggactggatatgcaaggaag
atctcatttgagaagataaagttaatagacgttaataaccctgttatcatcgatcaattc
tactgtccaagacaaataaattgccaaaacagcacatcagctgtggagttgagtgacata
cgttatacaagtatatccgggacatcaggaacagatcaagtgattaacctgagttgcagc
agaagccatgggtgcaccaacatcagcatcgaacgagtttatataaaatcaacaactcca
gggaagagggtttatgccaaatgcatcaatgctcacggaacttggtctcatacagtacct
gatgtcaaatgccttttgccatga
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