Daucus carota (carrot): 108193196
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Entry
108193196 CDS
T05350
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
dcr
Daucus carota (carrot)
Pathway
dcr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108193196
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcr02000
]
108193196
Transporters [BR:
dcr02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
108193196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_16
AAA_29
AAA
AAA_28
RsgA_GTPase
nSTAND3
RuvB_N
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
108193196
NCBI-ProteinID:
XP_017215242
LinkDB
All DBs
Position
7:40481392..40489145
Genome browser
AA seq
1453 aa
AA seq
DB search
MDGSDIYNASNSFRKSGNLGNLSSVWRNNGMDVFSKSSRKSDFFDDEEALKWAALQKLPT
YNRLRKGLILDPSGEGGHGVLEVDVESLDVQQRKELLERLVKVSEGENEKFLMRLRERLD
RVGIALPQIEVRFEHLSVDAKVYVGSRALPTFLNFVGNVIEGFLNYLHILPNRKKDLSIL
RDISGIVKPCRMTLLLGPPSSGKTTLLLALAGKLDSDLKTSGSVTYNGYGMHEFVPQRTA
AYISQYDCHIGEMTVRETFAFSARCQGVGSRYEMLAELSRREKEANIKPDPDIDLFMKAA
ATEGQEASVVTDYIIKLLGLEICADTVVGSEMIRGISGGQRKRVTTGEMLVGPSNALFMD
EISTGLDSSTTYQIVNSLRHAVHILQGTALISLLQPAPETYDLFDDIILLSDGLIVYQGP
RENVLEFFESMGFKCPERKGVADFLQEVTSKQDQKQYWLHKDEPYRYVTAQEFSEAYLSF
HVGRRLGDELGTPYHKSKSHPAALTTNKYGVRKMELLKACTSREILLMKRNAFVYIFKSA
QLFIVALITMTLFLRTEMHRESLNDGSIYMGALFFTVSTIMFNGMAELSMTIAKLPVFYK
QRDLLFFPPWAYALPSWIIKIPISFIEAFIWVLLTYYVIGLDPNAGRLFKQYLLLVLINQ
MASALFRTIAAAGRSLIVASTFGSFALLILFALGGFVLSRVNVKQWWVWGYWTSPMMYGM
NAIAVNEFLGHQWNHVLPNTTEPLGVLILKSRGFFPYGYWYWIGVGALLGYIFLFNFSFT
LALNFLNPLGKPQAIIPAESYKGRTKEGVNQQSFKDGSDHMAKNSPPFLSARTEDTAEAH
NKRKGMVLPFEPHSITFNEIKYSVDMPQEMKEQGISEDKLMLLKGVSGAFRPGVLTALMG
VSGAGKTTLMDVLAGRKTGGYIDGHITISGYPKKQETFARISGYCEQNDIHSPHVTVYES
LLYSAWLRLPIEVDSRSRKMFVDEVMELVELNTLKDALVGLPGVSGLSTEQRKRLTIAVE
LVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM
KQGGLELYVGPVGRHSCELIKYFEEIEGISKISEGYNPATWMLEITSPKQEMILGIDFTE
VYKNSDLYRRNKALITELSTPRPGSRDLTFSTQYAQSFLSQFVACLWKQRASYWRNPSYT
AVRFLFTTFIALMFGTMFWDLGTKGKTRQDLFNAMGSMYTAVIFIGIQNASSVQPVVAVE
RTVFYRERAAGMYSSLAYALAQVLVEIPYIFVQTVVYGAIVYSMIAFEWTAAKFLWYLFF
MFATLLYFTYYGMMTVALTPNPSIAAIIAGAFYGLWNLFSGFIIPRTRMPIWWRWYYWAC
PVSWTLYGMLASQFGDVQDVLVDANISVAEFLETFFGFHHDFVGVVAAVVSGFALLFAFI
FAYSIRVLNFQNR
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggatggaagtgatatatacaatgcaagcaatagttttagaaaaagtggcaatcttgga
aatctttcttcagtgtggaggaataatggcatggatgttttctcaaagtcatcaagaaaa
agtgacttttttgatgatgaggaggctctgaaatgggctgctctgcagaagctgcctact
tataatcgcctgagaaaagggcttattcttgatcctagtggggagggtggacatggggtt
cttgaggttgatgtggagagtcttgatgtgcagcagagaaaggagttgttggagaggctg
gtgaaggtttctgagggtgagaatgagaagttcttgatgagacttagggagaggcttgac
agagttgggattgcattgccccaaattgaagttagatttgagcatttaagtgttgatgca
aaggtttatgtagggagcagggcgttgcctactttcttgaattttgtagggaatgtaatt
gagggctttctgaactacctccacatactaccaaatagaaagaaggatttgtctatactt
cgtgatatcagtggaattgtcaagccttgcagaatgacattgcttcttgggccgccaagt
tctggcaagacaacattgctgctggctttggctggaaagcttgattctgatcttaaaact
tctgggagtgtgacttacaatggttatggcatgcacgaattcgtaccccagagaactgct
gcctatatcagtcaatatgattgccatataggagagatgactgtgagagaaacctttgct
ttttctgcaaggtgccagggagtcggatctcgctatgagatgctagctgaactgtcaaga
agagagaaagaagcaaacattaagcccgatcctgacattgatctctttatgaaggctgct
gcaactgaaggacaagaggccagtgtggttacagattatattataaagcttttgggacta
gaaatctgtgcagatactgtggttggaagtgaaatgataaggggtatttctggtggacaa
aggaagcgtgttactacaggtgaaatgttggttggaccatcaaacgcactttttatggat
gagatatctactggtttggacagttcaacaacatatcagattgtaaattcactacgccat
gcagtccacattcttcaaggaactgctctcatctcccttttgcagccagccccagaaact
tatgatttatttgatgatattatcctcctatctgatggccttatagtttaccaaggtcct
cgagaaaatgtgcttgaattttttgaatcaatgggtttcaaatgtccagagaggaaagga
gttgcagacttcttgcaagaagtaacatcaaaacaggatcagaagcaatactggttgcat
aaagatgaaccttacagatatgttacagcccaggaattttccgaagcttacctatcattc
catgtggggcggagactcggtgatgaacttggaactccatatcacaagagcaaaagtcac
ccagctgctttgacaaccaataagtatggtgtaagaaagatggagctcttaaaagcatgt
acctcaagggaaattttgcttatgaaacgaaatgcattcgtttacatcttcaaatcggcc
caacttttcattgtggcattgattacgatgacattattcctgagaactgagatgcacaga
gaatcactaaatgatggaagcatatacatgggtgctttgttttttaccgtaagtacgatc
atgtttaacggaatggccgagctgtctatgaccatagcaaagcttcctgtcttttataag
caaagggatcttctgttttttcccccttgggcgtatgcactgccttcatggatcatcaaa
atccctatttcatttattgaagctttcatctgggtacttcttacttattacgttattggg
ttagatccaaatgctggaagattgtttaaacagtacctgcttttagtactcatcaaccag
atggcttcggcattgttccggactattgcagcagcgggaaggagtttgattgttgcaagc
acgtttggttcatttgcattgcttatactatttgcacttgggggcttcgtgttgtcacga
gttaacgtaaagcaatggtgggtatggggctactggacatcgccaatgatgtatgggatg
aatgccattgcagtgaatgaatttcttgggcaccagtggaatcatgttcttcctaacact
acagagccactaggagtcttgatcttgaaatcacgagggttcttcccctatggatattgg
tactggataggagttggggcattgcttggatatatatttcttttcaatttctccttcacc
ctggctctgaattttcttaaccctcttggaaagcctcaagctattataccagcagaaagc
tacaaaggaagaactaaagagggcgttaatcagcagtcatttaaagatggaagtgatcat
atggcaaaaaattcacctccatttttatctgctagaacagaagatactgcggaggctcat
aacaagaggaaaggaatggttctaccttttgaaccacactcaattacgtttaacgaaatc
aaatattctgtagacatgcctcaggaaatgaaagagcaaggtataagtgaggataagttg
atgctcttaaaaggtgtgagtggtgctttcaggcccggtgttcttactgctttaatgggt
gtaagtggtgctggaaaaacaacactgatggatgtactggcgggtagaaaaacaggtgga
tatattgacggtcatattacaatatctggttatccaaagaaacaagaaacctttgctcgg
atatctggatactgtgaacagaatgacattcactcacctcatgttactgtctatgaatct
ttgctctactcagcgtggttgcgactgcctatagaagttgattcgaggagtagaaagatg
tttgttgatgaggtcatggaacttgttgaactaaacactttgaaggatgcacttgttggc
ttgccaggtgtaagcggactatcgaccgagcagcgcaagagactaactattgcagttgag
ctggtggcaaacccatcaataatatttatggatgagccaacttcaggtctggatgcaaga
gctgctgctattgttatgagaacagtgagaaacacagtagacacaggaagaacagttgtt
tgcaccatccatcaaccaagcatagacattttcgaagctttcgatgagttattactgatg
aaacaaggagggctggagctgtatgttggaccagtgggacggcattcttgcgagctaatt
aagtactttgaggaaatagaaggaataagtaaaatcagtgagggatataatccagccacc
tggatgttggaaatcactagtcctaagcaagaaatgattcttgggattgatttcactgaa
gtgtataagaattcggatctgtacaggagaaacaaagctttaattactgaattaagtacc
cctcgtccggggtcaagggatttaactttctctactcagtatgctcaatcattccttagc
cagtttgtagcttgtctgtggaaacagagagcatcatactggcggaatccttcctacact
gcagtcagatttctcttcacaaccttcatagcattgatgtttgggacgatgttctgggat
cttggtaccaaggggaaaactaggcaagatctcttcaatgcaatgggatctatgtatact
gcggttatctttattggaatccaaaatgcttcatcggtgcagccagtagtggctgtcgaa
cggacagtgttttacagagagagagctgctggaatgtactcgtctttggcatatgcatta
gctcaggttctggtagaaataccatacatttttgtgcaaactgtggtatatggtgctatt
gtatactcaatgatcgcatttgagtggacagctgcaaaattcctatggtacttgttcttc
atgtttgccactttattgtacttcacctattatggcatgatgaccgtggctctgactccc
aacccaagcatcgctgctattatagccggtgctttttacggactatggaatttattttcc
ggatttatcatccccagaactaggatgccaatatggtggagatggtattactgggcctgc
cctgtctcgtggacactgtatggaatgctggcttctcagtttggagacgtgcaggatgtg
ctggttgatgcaaatatcagtgtcgcagaatttctggaaacattctttggatttcaccac
gactttgttggagttgtcgcagctgtcgtctctggttttgcacttctttttgctttcatt
ttcgcgtattccatcagagtactgaacttccaaaatcgatag
DBGET
integrated database retrieval system
