Daucus carota (carrot): 108193209
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Entry
108193209 CDS
T05350
Name
(RefSeq) heparanase-like protein 1 isoform X1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00531
Glycosaminoglycan degradation
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
108193209
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dcr00536
]
108193209
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
108193209
Glycosaminoglycan binding proteins [BR:
dcr00536
]
Heparan sulfate / Heparin
Enzymes
108193209
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
108193209
NCBI-ProteinID:
XP_017215263
UniProt:
A0AAF1B8R8
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All DBs
Position
7:complement(38140183..38144722)
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AA seq
539 aa
AA seq
DB search
MGLFIHLFIFVVCFSTTLGKNVEHAELVVDSTVVLAETDENYICATIDWWPHDKCNYNNC
PWGFSSAMNLDLNHPLLSKAVEAFKSLRIRVGGSLQDRVKYDMGNLDYTCHPFAKGDGLF
GFSEGCLNMSRWDDLNNFFMKTGAIMTFGLNALYGRHKISHREWGGDWNFSNAHDFMNFT
ISKGYQIDSWEFGNELSGKGIGAFVGAEQYAKDIINLKAILDKLYKNFHPKPLLVAPGGF
YEKEWYDKLLEVSGSNVVNVITHHIYNLGPGVDPNIVDKILNPLHLSKVSTTFSSLEQTI
KKYGPWASAWVGESGGAYNSGGRHVSDTFVNSFWYLDQLGIAAEYNTKVYCRQTLIGGNY
GLLNITTFVPNPDYYSALLWHQLMGKGVLSVESSASPHLRSYAHCSKERAGVTLLLINLS
NQTSFKTSVQNTASRIVVTIEEISKRKKTFVHHLKEAVSWIGVKASDVYIYREEYNLTPQ
NGDIRSKIMLLNGDPLILTSDGDIPSLAPVHVNTSSPLSVDPLSIKFIVLPNFIAPGCK
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgtttattcacttgtttatctttgtggtgtgtttttctaccactttgggaaaa
aatgttgagcacgcggaacttgtagtcgattcaactgtagtacttgctgaaacggatgaa
aactatatatgtgccacaattgattggtggcctcatgataagtgtaactacaacaattgc
ccatgggggttttcatcagcgatgaacttggatttgaatcatcctttgctttcgaaagct
gttgaagcttttaagagtttaagaataagagttgggggatctctgcaagaccgagtaaaa
tatgatatgggaaatctggactacacttgtcatccatttgcaaaaggagatgggttgttt
ggatttagcgagggatgtttaaacatgagtaggtgggatgacctgaacaactttttcatg
aaaacaggtgcaataatgacatttggcttgaatgcactatatggtagacacaagattagc
cacagagagtggggaggagactggaattttagcaatgcccatgattttatgaacttcacc
atttccaaaggataccagatagattcttgggaatttggtaatgaattaagtggcaaggga
ataggtgcattcgttggtgctgaacagtatgccaaagatattattaacctaaaagctata
ttagacaagttgtacaagaactttcacccaaaacccttactcgttgcaccaggtggattt
tatgaaaaggagtggtatgataagcttcttgaggtttcaggttcaaacgttgtcaatgtt
attacgcatcatatatacaacttaggaccaggtgttgatcctaatattgtggataaaatt
ttaaacccactccacctgagtaaagtatcaacgacttttagcagtctcgaacagacaata
aagaaatatggtccttgggcttccgcctgggtcggagaatctgggggagcctataacagc
ggtggtcgtcatgtctctgacacctttgtgaacagcttctggtatctggatcagcttgga
attgcggcagaatacaatactaaggtttattgcaggcagaccttgattggtggaaactac
ggacttttgaatataacaacctttgtgcccaaccctgattattatagtgcactattatgg
catcagcttatgggaaaaggggttctttctgttgagagtagtgcttctccacatttgcgg
tcttacgcacattgttcaaaggaaagagcaggtgttactttacttctaatcaacttgagc
aaccaaacgtcttttaaaacgagtgttcaaaacacggcaagcaggatagtggttaccata
gaggaaatcagtaaaaggaaaaagacttttgtgcatcatctcaaggaagctgtttcttgg
attggagtcaaagcatcagatgtatacatatacagagaagaatacaacttaactccgcaa
aatggtgatatccgaagcaaaattatgcttcttaatggagacccgttaattcttacaagt
gatggggatattccaagtttggctccggttcatgtaaacacaagttctccgttatcagtt
gatcctttgtcgattaagttcatagtactgcccaacttcattgctccaggctgcaaatga
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