Daucus carota (carrot): 108193219
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Entry
108193219 CDS
T05350
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP65
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108193219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108193219
03110 Chaperones and folding catalysts [BR:
dcr03110
]
108193219
04121 Ubiquitin system [BR:
dcr04121
]
108193219
Enzymes [BR:
dcr01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
108193219
Spliceosome [BR:
dcr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
108193219
Complex C
U4/U6.U5 tri-SnRNP related factors
108193219
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
108193219
Chaperones and folding catalysts [BR:
dcr03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
108193219
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
U-box type E3
108193219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
U-box
zf-NOSIP
Motif
Other DBs
NCBI-GeneID:
108193219
NCBI-ProteinID:
XP_017215279
UniProt:
A0AAF0XL83
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All DBs
Position
7:36388660..36394702
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AA seq
599 aa
AA seq
DB search
MGKKQHSKDRMYLTKTEWATEWGGAKSKELRTPFKRLPFYCCALTFTPFEDPVCTADGSV
FDIMHIRPYIRKYGKHPVTGAPLKNEDLITLNFHKNSDGEFHCPVLDKVFTEFTHIVAIK
TTGNVFCYEAIKELNLKTKNWKELLTDEPFKREDIITIQNPNAIDSKVLLDFDHIKKSLK
VDDEEIKKMESDPTYNINATGDIKQMLKELGTDNGKKLSLHGGGGEKAQNERAAALESIL
AARSRIKDDSGSKKSGEFKVQTGYSIVDAASASVHGRSAAAAKAAPSDKTAARIAMHKAG
DRTPVNAKLVKSSYTTGAASRSFTSTSYDPVTVNEYEYVNVEKNPKKKGYVQLHTTHGDL
NIELHCDITPRACENFITLCERGYYDGVSFHRSIRNFMIQGGDPTGTGKGGESIWGKPFK
DEVNSKLLHSGRGVVSMANSGPHTNGSQFFILYKSATHLNYKHTVFGGVVGGLTTLSTME
KVPVDDDDRPLEEIKINSVTVFVNPYAELDEEEEKKAIEEKEKEAEDEDKDKLGSWFSNP
GTGTTETGVGGGGVGKYLKTRDPPAKSKPPIDTDLDTVSVTKKRKLGVKGNELKDFSAW
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaacaacacagcaaagatcgcatgtacttaaccaagacggagtgggccact
gaatggggcggtgctaaatccaaagaactccgcactcctttcaaacgcctccccttctat
tgttgcgctctcacctttacaccgttcgaggatccagtgtgcacggctgatggcagtgtt
tttgatatcatgcacatacgcccctatatcaggaagtacgggaagcatcctgttactggt
gcgccgcttaaaaatgaggaccttattacacttaatttccataagaattccgatggcgag
tttcattgcccagttttggacaaggtttttacagaatttacacacatagttgcaataaag
acaacgggaaacgtgttttgctatgaggccatcaaagaattgaatctaaaaactaagaac
tggaaggagcttctcaccgatgaaccttttaagagagaagatattataacaattcagaat
ccgaatgcaattgacagcaaagttctcttggattttgatcacataaagaaaagtttgaag
gtcgacgatgaagaaataaagaagatggagtcagatccaacatataacattaatgcgacc
ggagatattaagcagatgcttaaggagcttggaactgacaatggaaagaaactttcatta
catggtgggggtggggaaaaggctcaaaatgaaagggctgctgctcttgaatccattcta
gctgctagatcacgtatcaaggacgactcaggatcaaaaaaaagtggcgagttcaaggtc
caaacaggttacagtattgtagatgctgcatctgcttctgtacatggaagaagtgcagct
gctgcaaaagctgctccaagtgataaaactgctgctcggattgctatgcacaaggctggt
gatagaactcctgttaatgcaaagctggtgaagagcagttatactactggtgctgcttca
agatccttcacatccacttcttatgatcctgtcacagtaaatgaatatgaatatgttaat
gttgaaaagaaccctaagaagaaaggttatgttcaattgcatacgacacatggtgatttg
aacattgagcttcactgtgatataactcccagggcatgtgagaacttcataacattatgt
gagagaggctattatgatggcgtgtcttttcacaggagtataaggaactttatgatccaa
ggcggtgatcctactggcactggaaaaggaggagaatctatatggggaaagccctttaaa
gatgaagtaaactccaagttgcttcactctggaagaggcgttgttagcatggcaaacagt
ggtccacatacaaatggttcacaatttttcatcttgtacaagtctgccactcatctgaac
tacaaacatacagttttcggtggagttgtaggaggcttaacaactctatcgactatggag
aaggttcctgttgatgacgacgatcgtcctttggaagaaatcaagataaatagtgtcacg
gtgtttgttaatccatatgccgaacttgatgaagaagaggaaaagaaggctattgaggaa
aaagaaaaagaagcagaggatgaagataaagataagcttgggtcatggtttagcaatcca
ggcacgggaacaactgaaactggagttggtggaggtggtgttggtaaatacttgaagaca
cgtgatcctccggctaaatctaaaccccctattgacactgatctagatacagtttctgta
acaaagaaaagaaaattgggtgttaaaggtaacgaactaaaagacttctctgcatggtag
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