Daucus carota (carrot): 108193232
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Entry
108193232 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108193232 isoform X2
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00280
Valine, leucine and isoleucine degradation
dcr00650
Butanoate metabolism
dcr01100
Metabolic pathways
dcr04146
Peroxisome
Module
dcr_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
108193232
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
108193232
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108193232
Enzymes [BR:
dcr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
108193232
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
DUF5422
Motif
Other DBs
NCBI-GeneID:
108193232
NCBI-ProteinID:
XP_017215300
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Position
7:5772379..5778801
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AA seq
474 aa
AA seq
DB search
MIVHHKIGKDSFTDYQPRVSSSSDRPLRLVVYVSQSSSIPVPSIAVACTMSSLEQPLGLE
KLPSLSTIERLNSFRSTSCSPRGVDGGMGECWIEGRSSGSSNSCSEDFEEYRRESFTWSR
TQNDISCRSSCLDHSNGRYRIECDSLYLPNHQYDSYGNNGRDIKDIVHKVCKGLPDYVKI
VEVGPRDGLQNEKIVVPTAVKVELIRRLVSTGLSVIEATSFVSPKWVPQLADAKDVMKAV
KNLEAVKLPVLTPNLKGFEAAVAAGAREVAIFASASEAFSKLNINCSIAESLARYRVVAE
AARKLSVPIRGYISCVVGCPDEGAIPPSKVAYVAKELYEMGCYEISLADTIGVGTPGTVL
PMLEAVMAFVPVENLAVHFHDTYGQALPNILMSLQMGINVVDSSTAGLGGCPYAKGASGN
VATEDVVYMLHGLGIKTNVDLGKLLSAGEYISKHLGRPSGSKTAIALSRFTASA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgattgtacaccacaaaattggcaaagactcttttactgactaccaaccaagagtttct
agtagttcagaccgccccctcagacttgttgtctatgtatcacaatcaagctcaatccca
gttccttccattgcagtcgcttgtacaatgtcaagtttggagcagccccttggtttggag
aagttaccaagcctgagcactattgagcgacttaatagtttcagatctacttcttgcagt
cctagaggagttgatggtggaatgggggagtgctggattgaaggaaggagttccggctca
tccaatagctgcagtgaagactttgaagagtacaggagagagtctttcacttggagccgg
acacagaatgacatctcttgtaggagttcatgtttagaccacagtaatggaagataccga
attgaatgtgattcgctatatttgccaaatcatcagtacgactcatatggcaacaatggt
agagacatcaaggacattgtacataaggtgtgcaaaggtttaccagactatgtgaagata
gtggaagtcggtccaagagatggtttacaaaatgaaaagattgtcgtccctacagctgta
aaagttgaactaattcgcaggctagtttccactggtctatctgttattgaggctacaagt
tttgtctcaccaaaatgggtacctcagctagcagatgcaaaagatgtaatgaaagcagtt
aaaaatttggaagcggttaaactgcctgttttgacacccaatttgaagggctttgaagcg
gctgttgctgctggtgcaagggaagtagctatcttcgcatctgcctcagaagccttttcc
aagttgaatattaattgtagtattgcagaaagtcttgcacgttatcgtgttgttgcagaa
gctgccagaaaactttcagtacctattcgtgggtatatatcatgtgttgttggctgccca
gatgaaggtgcaatcccaccatcaaaagttgcatatgtagctaaagaactttatgaaatg
ggttgctacgaaatctcgctagctgatacaataggagttggtacccctggtactgttctt
ccaatgctcgaagctgtaatggctttcgttcctgttgagaatcttgctgtccattttcac
gatacttatggacaggcccttcctaacatattaatgtccctccaaatgggaatcaatgtc
gtggattcctctactgcgggtctaggagggtgtccatatgcaaagggtgcttctggaaat
gttgcaacagaggatgttgtctacatgcttcatggactgggcataaaaactaatgttgat
ctgggaaagctcttgtctgcaggggagtacataagcaagcatttaggccgaccctcaggt
tcaaaaaccgccattgctttaagccgattcaccgcaagcgcctaa
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