Daucus carota (carrot): 108193339
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Entry
108193339 CDS
T05350
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00750
Vitamin B6 metabolism
dcr01100
Metabolic pathways
dcr01240
Biosynthesis of cofactors
Module
dcr_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
108193339
Enzymes [BR:
dcr01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
108193339
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
NanE
His_biosynth
Motif
Other DBs
NCBI-GeneID:
108193339
NCBI-ProteinID:
XP_017215433
UniProt:
A0A161ZLD0
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Position
7:complement(7897389..7898607)
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AA seq
308 aa
AA seq
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MAGTGVVAVYGNGAITETKQSPFSVKVGLAQMLRGGVIMDVVNAEQARVAEEAGACAVMA
LERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDYVDES
EVLTLADDENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV
RSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALM
MQMGCDGVFVGSGVFKSGDPVRRAKAIVQAVTHYSDPEMLAEISCGLGEAMVGLNLDKNV
ERYANRSE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggccggcacgggagtagtcgccgtttacgggaacggtgccatcaccgagacaaagcaa
tcccctttctccgtcaaggtcggtctggctcagatgctccgcggcggcgtcatcatggac
gtcgtcaacgcggagcaagcgcgtgtggcggaagaagccggcgcgtgcgccgtcatggct
ctggagcgcgtccccgccgacatccgcgcccaaggcggcgtcgccaggatgtcggatccg
cagctgattaaggagataaagcaggccgtgacgattccggtgatggcgaaagcgaggatt
gggcatttcgtggaggcgcagatattagaggcgattggggttgattatgtggatgagagt
gaggttctgaccttagctgatgatgaaaatcatataaataagcataattttaggatccct
tttgtctgcgggtgtcgaaatttgggggaagccttgaggaggattcgagaaggtgctgcg
atgattcgaaccaagggtgaagctggcactggtaatataattgaggctgttaggcatgtg
aggtctgttatgggtgatatcagggttttacggaacatggatgatgatgaggttttcact
tttgccaaaaaaattgcggcgccttatgatttggttatgcagactaagcaattggggagg
ttgcctgttgttcagtttgcggcgggtggcgtggcgactcctgctgatgctgcgctcatg
atgcaaatgggctgtgatggcgtttttgttggctcgggtgtgtttaagagtggggatcct
gttaggagagccaaggccattgtgcaggcggttactcattatagtgatcccgagatgttg
gcggagattagctgtggattgggagaggctatggtgggattgaatttggataagaatgtc
gagaggtatgccaatcggtctgaatga
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