Daucus carota (carrot): 108193483
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Entry
108193483 CDS
T05350
Name
(RefSeq) RNA pseudouridine synthase 7
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108193483
Enzymes [BR:
dcr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
108193483
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108193483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
108193483
NCBI-ProteinID:
XP_017215645
UniProt:
A0A164UP70
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All DBs
Position
7:39948100..39960740
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AA seq
382 aa
AA seq
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MKRERDEMESIVWQTPANPPQRHDYIFNNGVRYVRPYYFEFISHAKKRWAGKTIVDLFAD
EFKGRPRDYYVSAVESGRIQVEGETVPASYIVQSSQKISHFLHRHEPPVMALDVIILQKE
PDVLTVYKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPIHRLDRLVSGLLILARSASK
ADFFRQQIESGVIEKKYIAKVVGVFPEDEKIVDANVNFNAREGRSTAEVSKDCGNGITPL
KGKVACTKFKRISTDGKHSIVSCQPITGRTHQIRVHLQYIGHPIANDTLYLSKSADNVST
EGIRTGREFKHFSQFDSDLGSGDASEKGSGEDFTNDPLCTNCPNLAPKGYDGFEEGLWLH
CVQYSGQGWAYECPLPDWAILS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgagagagacgagatggagagcattgtttggcaaacccccgccaatccaccc
caacgccacgactacatcttcaacaacggagttcgttatgtcaggccctattactttgag
ttcatatctcatgcgaagaaacggtgggcggggaagacgattgttgatctttttgcggat
gagttcaaaggccggcctcgcgattactatgtttccgctgttgaatctggtcggatacag
gttgaaggagaaacggtgccagcatcgtatatagtccagtcatcccaaaagattagccac
ttcttgcacaggcatgaaccaccagtcatggccttggatgtcataattctgcaaaaggaa
ccagatgtcttgactgtttataagcctgcatctgtccctgtgcatccatgtggtcaatac
cgtaagaacacggtcgttggcattcttcaggcagagcatgacttagcacctctatttcct
attcatcgactcgatcgcttggtctcaggactgcttatcttggccagaagtgcttctaag
gctgattttttcaggcaacagattgaatcaggtgtgatagagaagaaatacattgcaaag
gtcgttggagtatttcccgaggatgagaaaattgtcgatgcaaacgtaaatttcaatgcc
cgagaaggaagaagcacagcggaggtgtccaaggattgtggtaatggcattactccccta
aagggtaaggttgcatgcacaaaatttaaaaggattagcactgatgggaaacatagcatt
gtatcatgtcaacctatcactgggagaacccatcaaatacgtgtccacctgcaatatatt
ggtcatccgatagccaatgatacgctgtacctctctaaatctgctgacaatgtttctaca
gaaggaattaggactggtagggagtttaaacatttctctcagtttgactcagatttagga
tctggtgatgcatctgaaaaaggttctggagaagatttcaccaatgatccattgtgcaca
aactgtcccaacttggcacctaaaggatatgatggatttgaagaaggcctttggttgcat
tgtgtccaatacagtggacaaggttgggcttatgaatgcccacttccagattgggccatt
cttagctag
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