Daucus carota (carrot): 108193649
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Entry
108193649 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108193649
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108193649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcr03009
]
108193649
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
108193649
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
NOP5NT
Motif
Other DBs
NCBI-GeneID:
108193649
NCBI-ProteinID:
XP_017215884
UniProt:
A0AAF0WCQ8
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Position
7:complement(26533979..26540745)
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AA seq
532 aa
AA seq
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MPIRFCWASRVSVNLNHRLSLGKSERIRGNMINGRPVKISKNNSRPSSVYSKFAPPELRY
LIFKGFNPPPLPSPPAPPSITVPRRPSYRKSQIIVPHDRFRGVYVSKDRTSLYTKNLVPN
LSNDGDVVVSVKDDDGTVNEYREWDPYRSKFAAAILCGAENIWIEPGCRVLVICSRDDEQ
FGITISHISDIVGPGGMVYVVDHKNGMTLADIAEKRFNIVPIICFNVPEHYRMLINMVDV
LFAAPNEPGETQVAYINALYFLKTGGHYVLFVQADCIESRSRGDAVFSSMIRPKEFEFKR
KQRVTLEPFDRDHAYLFGDFRTIEMVDPSCLVALKFWTAPRLYRGDREHVTIYEQLWDLP
VYLLFESSCGYALLQAHDMLKVERNYLAIEEYISRFDDFFELIAYQPFKSTDEALVHLNA
NCKGIVYKQMLDFLVFNLPTPMEGGKHCYSLALVSGGISEDIINKTKIACQANLFHVDIL
RGVRMHIDKVINDIKPGDLEKAQLDLARSYCRQKLISPDEKKPKKEKRQISG
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgccgattaggttttgttgggctagccgcgtatctgtaaatctcaaccatcggctttcg
ttggggaaaagtgaaagaatacgtggcaatatgataaacggcaggccagtaaaaatctct
aaaaataattctcgcccttcttctgtttactcaaagttcgctcccccggaacttcgatat
cttatttttaaaggtttcaatccacctcctttaccatcaccaccagcaccaccatcaatc
acggtgccacgtagaccctcatatcgtaaatctcaaatcatagtgcctcatgatagattt
cgaggtgtttatgttagcaaggataggacgagcttgtataccaaaaatttggtcccaaat
ctctccaacgacggtgatgtcgtggtttctgttaaggatgatgatgggactgtaaatgag
tatagagaatgggatccgtataggtcaaagtttgctgctgctattctttgtggtgctgaa
aatatatggatcgaacctggttgccgagtattagtgatttgctcgcgagatgatgaacaa
tttgggatcacgatttcacatatctctgatattgttggacctggaggtatggtttatgta
gtggaccacaaaaatgggatgactcttgcagacatcgctgaaaaacgcttcaatattgta
cctattatatgtttcaatgttccagaacattatcgcatgcttattaatatggtagatgtg
ctgttcgctgctccaaatgaacctggagagacccaggttgcatatataaatgccctgtac
ttccttaaaactggtggacattacgtgctctttgtccaggctgattgtattgaatcaaga
agccgtggtgatgctgtgttcagttctatgatcagacctaaagagtttgagttcaagcga
aagcagcgagtcactctggaaccatttgacagagaccatgcctatctttttggtgatttt
cgcaccattgagatggttgaccctagctgtttagtggctcttaagttttggactgcaccg
aggttatataggggtgatagggagcatgttactatttatgaacaactttgggacttgcca
gtttatctgttgtttgaatcctcctgtggatatgctctcttgcaagctcatgacatgttg
aaggttgagagaaattatctagccattgaggagtatatcagtcgctttgatgatttcttt
gagcttatagcttatcaaccttttaaatctactgatgaagctctagttcaccttaatgct
aattgcaaagggattgtgtacaagcaaatgctagactttctggtgtttaatcttccaaca
ccgatggagggtggtaaacactgttattcactggcacttgttagtggaggcatatcagag
gatataataaacaaaaccaaaattgcttgccaggcaaatttgtttcatgttgatatactt
cgtggtgtgcggatgcatattgacaaagtcatcaacgatattaagccaggagacttggaa
aaagcgcaattagatctcgctcgaagttactgcaggcaaaagcttatatcaccagatgaa
aaaaagccaaaaaaagaaaagagacagatctcaggctag
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