Daucus carota (carrot): 108193680
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Entry
108193680 CDS
T05350
Name
(RefSeq) vesicle transport v-SNARE 13
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108193680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108193680
Membrane trafficking [BR:
dcr04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
108193680
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
RIFIN
ETRAMP
Cauli_AT
Pox_EPC_I2-L1
Prominin
DUF5798
Fusion_gly
Motif
Other DBs
NCBI-GeneID:
108193680
NCBI-ProteinID:
XP_017215936
UniProt:
A0AAF0XMV4
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Position
7:complement(31790389..31794369)
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AA seq
221 aa
AA seq
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MSEVFEGYERQYCELSANLLKKCTSASLVDGEQKKQKLSEVKAGLDDAESLIRKMDIEAR
SLQPNVRAVLLAKLREYKSDLNNLKSEVKRILSTNLNQAARDDLLESGMADAQMVSEDQR
GRLLMSTERLNKSSDRVRESRRTMLETEELGVSILHDLHQQRQSLLHANSTLHGVDDNIS
KSKKVLTAMSKRMSRNKYIIGTVVAVLVLAIILILYFKLKN
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggtgtttgaaggttatgaacgtcagtactgcgaactttccgctaatttgttg
aaaaagtgtacttctgctagtcttgtagatggagaacaaaagaaacaaaaactttctgaa
gtgaaagcaggtttagatgatgctgaatctttgatccgtaagatggatattgaagcaaga
agtttgcagcccaatgtgagagccgtgcttcttgctaagttgagagaatataaatctgat
ctgaacaacttgaaaagtgaagttaaacgaattttatcaaccaacttaaatcaggctgct
agagacgacttgctcgagtcgggcatggctgatgcacaaatggtatcagaagatcaaaga
gggagattgctaatgtcaactgagagactaaataaatcgagtgacagagtcagggaaagt
agacggacaatgctggaaacagaagaacttggggtttcgattctccatgatctgcaccaa
cagcgacaatcacttttacatgccaatagcacgcttcatggagtggatgacaatattagt
aaaagcaagaaagttctaacagctatgtcaaaacggatgagcaggaacaagtatatcatc
ggcactgtggttgctgtacttgtcttggcaatcatcttgattctgtacttcaaattgaaa
aattag
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