Daucus carota (carrot): 108193851
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Entry
108193851 CDS
T05350
Name
(RefSeq) flap endonuclease GEN-like 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108193851
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108193851
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
Chromo_2
PHD_G2E3
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
108193851
NCBI-ProteinID:
XP_017216172
UniProt:
A0A164TWZ3
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All DBs
Position
7:29428766..29433397
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AA seq
603 aa
AA seq
DB search
MGVSGNFWDLLKPYARFQDSTFVRNKRVAIDLSYWIVQHETAVKSHVLHPHLRLTFFRTV
NLFSRFGAFPVFVVDGTPSPLKSQARIARFFRGSGIDISSLPVAEEGVSVERNHKFMKCV
EECIELIKLLGMPVLRAKGEAEALCAQLNKEGLVDACITADSDAFLFGANCLIKSLRPNT
KEPFECYYMSDIEAGLGLKREHLIAICLLVGNDYDLNGVEGIGLETALRFVKSFSEDEIL
NKLQEIGKYTADFCSFGGSVPSSDENSRKAKGPLHCSLCGHPGSKSTHLKFPCEYCNSDP
AEGCLEKPVSFKCNCSSCDMDRKHKQQKKNENWELKVCEKISREPNFPNENIIEIYLFSN
QETVEDAGQSLCWEAPNVDVLVDFLNYHQKWEPSYTRQRILPMLSTNFLREMASNPTDKL
LHEQFVFDSIHRVKIKFGHQLYVVKWKKATPAAGNSTYTIISEDSAECIHIIDEPDITEI
QFSSSDGCSFMLTDEDMELVRAAFPEKVNQFLREKEQKETTSRRKETGTRSEGTPEHAAT
TSSKSVQLSIKEFYRASKLQKQEKFAENSSTILEDNNILSSKRKRDASNKNLSKSARRKL
LFD
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgagtggtaacttttgggatttacttaaaccctacgctcgatttcaagattct
actttcgtcagaaacaaaagggttgcaattgatttgtcttattggattgttcaacatgag
actgctgttaaatctcatgttctccatccccatttgaggctcactttctttcgtactgtc
aatcttttttccaggtttggagccttccctgttttcgtagtagatggaacgccatccccg
ctaaaatctcaggcgcgaattgcacggttctttcgagggtcaggcattgatatctcgagt
ttgcccgtggcagaagagggtgtttcagttgaaagaaatcacaaattcatgaagtgtgtt
gaagagtgcattgagttgattaaacttcttggaatgcctgttctaagagcaaaaggagag
gctgaagctctgtgtgcccagttgaacaaagaaggtctggtggatgcatgtattactgct
gatagtgatgcatttctgtttggggctaactgtctcataaaatccctcaggcctaacaca
aaagaaccttttgagtgctactatatgtcagatatcgaagctggccttggcttaaagaga
gaacacttgatagctatttgtcttctggttggaaatgactatgatttaaatggtgtggaa
gggattgggctcgagacagcacttcgatttgtcaagtctttcagcgaggatgagattttg
aataaattgcaggagataggcaagtataccgctgatttttgctcctttggtggttctgtt
cccagttcagatgagaattcaaggaaggcaaaagggccccttcactgctcattatgtggg
catccaggaagcaagagcacacatcttaagtttccttgtgaatattgtaattcggatcct
gcggaaggctgcttagagaaaccagtgtcattcaaatgtaactgctcctcctgtgatatg
gataggaaacacaagcaacagaagaagaatgaaaattgggaactaaaagtttgtgaaaag
atatccagggagccgaattttccaaatgaaaatattattgaaatatatcttttcagcaac
caggaaactgttgaagatgctggtcaaagtttatgttgggaagcgccaaatgtagatgtg
ctggttgattttttgaattatcatcagaagtgggaaccttcctacacaaggcaaagaata
cttccaatgctgtcaactaattttctcagagaaatggcgtcaaatccaactgataaattg
ctgcacgaacagtttgtatttgattctatccaccgtgtgaaaataaagtttggacatcag
ttgtatgttgtcaaatggaagaaagctacgcctgcagcaggcaattccacctatacgatt
atatctgaagactccgctgagtgtattcatataattgatgaacctgacataacagaaatt
cagtttagtagtagtgatggatgctcatttatgctaactgatgaagatatggagctggtt
cgagcagcttttcctgaaaaagttaatcaattcttaagagaaaaggaacaaaaagagact
acatcaagaagaaaagaaacagggacaagatctgagggaactccagaacatgcagcaaca
acatcttcaaaatctgttcagctcagcataaaggaattctatcgcgcttcaaaattacaa
aagcaggaaaagtttgcagagaattcttccacaattttggaggataacaatatattgtct
tccaagagaaaaagagatgcatcaaacaagaacctttcgaagtctgcaaggcgcaaactc
ctttttgactag
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