Daucus carota (carrot): 108193903
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Entry
108193903 CDS
T05350
Name
(RefSeq) nuclear ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108193903
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
108193903
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
108193903
Prokaryotic type
108193903
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
108193903
NCBI-ProteinID:
XP_017216241
UniProt:
A0A164TK03
LinkDB
All DBs
Position
7:23469031..23473610
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AA seq
294 aa
AA seq
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MEKNEEKSIEKEENTSRKQKMNIQGYPIEGLSIAGHETCVIFPSLSLAFDIGKCPQRAVS
QDYLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPKVIKENVEKLFDVHRSMDQSELK
HTLIGLDIGEEFCLRKDLKVKAFKTYHGIPSQGYIVYAVKQKLKQEYLGLPGNEIKKLKN
SGVKITYTITTPEIAFTGDTMSDFILDSTNSDVLKAKILVMEATYVDSLVTVEHARDFGH
VHLSEIINYANRFENEAILLIHFSARYELKAIKDAVSALLPPLAGRVFALTEGF
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaatgaagagaagagtatagagaaagaagaaaacacaagcagaaaacaaaag
atgaatatacaagggtacccaattgagggtttatcaattgcaggccacgagacttgtgtc
attttccctagtcttagcttagcattcgacattggcaagtgccctcagcgtgctgtttct
caagattatctcttcatctctcatgcccatatggatcatattggtggtttgcctatgtat
gttgcaactcgaggattatacagaatgaagcccccaacaattattgtacccaaagtaata
aaagaaaatgttgaaaagctatttgatgtacacagatcgatggatcagtcagagctcaag
catactcttataggcttggatattggagaagaattttgtttaagaaaggacttgaaagtc
aaagcattcaagacttatcatggcattccaagccagggttatatagtctatgctgtaaaa
cagaaacttaagcaggaatatttagggctccctggaaatgagataaaaaaattgaagaat
tcaggtgtgaagatcacctacactattacaacgcctgaaattgcttttaccggtgacact
atgtcagacttcatcttagatagcactaacagtgatgttttgaaagcaaagattctcgtt
atggaggcaacttatgtcgatagtttagtgacagtagagcatgccagagattttggccat
gttcatttgtctgagataattaactatgccaatagatttgagaacgaagcaattcttctg
attcacttttctgctcgctatgaattaaaggctatcaaagatgctgtctctgcgctgctt
cctcctttggctggccgagtctttgccctcactgaaggattctga
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