Daucus carota (carrot): 108193951
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Entry
108193951 CDS
T05350
Name
(RefSeq) probable vacuolar amino acid transporter YPQ1
KO
K23678
solute carrier family 66 (lysosomal lysine-arginine transporter), member 1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108193951
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcr02000
]
108193951
Transporters [BR:
dcr02000
]
Solute carrier family (SLC)
SLC66: Lysosomal lysine-arginine transporter
108193951
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GFIT
Motif
Pfam:
PQ-loop
TMD0_ABC
Motif
Other DBs
NCBI-GeneID:
108193951
NCBI-ProteinID:
XP_017216301
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Position
7:40212185..40215517
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AA seq
395 aa
AA seq
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MKNPLLSVVLKNSDVASSTSYCVKERRPCVGWVDKYFKDCLCDTRDKLSFASGMLSLISW
GVAEIPQIITNFRSKSSRGVSLLFLLTWVLGDIFNLIGCLLEPVTLPTQYYTALLYTTST
VILVLQCLYYDHVYSWWKSKKVDANQPIEDVKKPLKPAKENDDDDSAIPTTDEGKINSNF
YFTSARSLAGSATPPNRSYLWTARSGPSALTLDGDSSSDDEVDAAVMTNKKSKTQPKPIP
RSAGYGAFLATSLNLPRSTKALLQASVAFSGRKLLQGNADTEKFVVGQCLGWMMAAVYMG
GRIPQIYLNIKRGSVEGLNPLMFIFALIANVTYVGSILIRSTEWDKIKANMPWLLDAVVC
VGLDLFIILQYIYYRYLGKRTAGGGGQDDDYSESP
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatccattgttatctgtagtgttaaagaactctgatgtggcgtcctcgacttcg
tattgtgtgaaggagagaaggccttgtgttggatgggttgataaatattttaaagattgt
ttgtgtgacactagagacaagctttcgtttgcttctggtatgttgagtttaatcagctgg
ggagttgctgaaatccctcagattatcaccaactttcggtctaaatccagccgtggtgtc
tcccttttgttcctcctcacttgggttcttggtgatatctttaatctgatcgggtgtctt
cttgaacctgtgacgctcccaacccagtactacactgccctgctctatacgacaagtaca
gtgatattagtgctgcagtgcctgtactatgatcatgtttatagttggtggaaaagcaaa
aaagtggatgctaatcaaccgattgaagatgtgaagaaacctctaaaaccagcaaaggaa
aatgatgacgatgattctgcaattccaactactgatgaaggcaaaatcaacagtaacttc
tatttcacatcagcacgatctttggcgggcagtgctacaccacctaatcggtcttatcta
tggactgcaagaagtggtccttcagcattgacacttgacggggactcatcttctgatgat
gaggtggatgctgctgtaatgacgaacaagaaatccaaaacccaaccaaagccaatcccc
cgttctgctggttatggtgcatttctagctacttcactcaacctgccaagaagcaccaaa
gctctactccaagcttccgtagcatttagtgggaggaaactcttacaagggaatgcagat
acagaaaaatttgtggttggccagtgcttaggttggatgatggctgctgtatacatgggt
ggccgaatccctcaaatttacttaaatattaaacgaggaagcgttgagggactgaatcct
ctcatgtttatctttgcactcattgccaatgtcacttatgtgggaagcattctcatacga
agcacggaatgggataaaataaaggccaatatgccatggttgttagatgcagtagtctgc
gttggactcgacttgtttataatattacagtacatctactacagatacctcgggaagcgg
actgctggtgggggaggacaggatgatgactattcggagagcccatga
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